DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10804 and SerT

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster


Alignment Length:717 Identity:239/717 - (33%)
Similarity:351/717 - (48%) Gaps:129/717 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GATNQGFMSDAFDESSELEQDPPPFGSEASTSKAKAELVAIATASADQQDIVEGEKEGEERESWD 122
            |.:|....||  |:.|...:|.........|:.||. ...:|...|:.:.|:........||:|.
  Fly    17 GRSNPAPWSD--DKESPNNEDDSNEDDGDHTTPAKV-TDPLAPKLANNERILVVSVTERTRETWG 78

  Fly   123 SKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAIGQRLRKGAI 187
            .|..||||.||:||.|||||||||:..:||||||||||.:.|...|:|:||:|||:||..|.|.:
  Fly    79 QKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFHRCGCL 143

  Fly   188 GVWSQVSPYLGGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESPLPWADCPTR---------L 243
            .:|.::.|.|.|:|.:..::...:.:||||||.|.:.||..||.|.|||..|...         .
  Fly   144 SIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWNTENCMQVT 208

  Fly   244 YKNFTYDHEPECVASSPTQFYWYRTTLQC--SESVDMPENFNYHMAIALIVSWFLVYICMVQGIT 306
            .:|||.      :|:||.:.::.|..|:.  ...:|........:|:.:...:.|||..:.:|:.
  Fly   209 SENFTE------LATSPAKEFFERKVLESYKGNGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVR 267

  Fly   307 SSGKIVYMTAIFPYVVLIIFFFRGITLKGAADGVAHLFTPRWETLLDPVVWLEAGTQIFFSLGLA 371
            |:||:|::||:.|||||||...||::|.||.:|:.:..||.|..|.:..||::|.:|||||||..
  Fly   268 SAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAASQIFFSLGPG 332

  Fly   372 FGGLIAFSSYNPANNNCYRDAILVSLTNCGTSMFAGVVVFSVIGFKATATFDRCTEERNGLVAQN 436
            ||.|:|.||||..||||||||::.|..||.||..||.|:|||:|:.|..  .:.:.::.||    
  Fly   333 FGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMAYV--QKTSIDKVGL---- 391

  Fly   437 KTHNLPVCDLQTELANSASGTGLAFIIFTEAINQFPGAQLWAVLFFLMLFTLGIDSQFGTLEGVV 501
                              .|.||.||::.|||....|:..|:::|||||.|||:||.||.||.::
  Fly   392 ------------------EGPGLVFIVYPEAIATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMI 438

  Fly   502 TSLVDMKLFPNLPKEY--IVG-----------ALCFSCCTISMCFANGAGSYIFQLMDSFAGNFP 553
            |:|.|         ||  ::|           |..|.|...:|.:   .|..:...::.:.....
  Fly   439 TALCD---------EYPRVIGRRRELFVLLLLAFIFLCALPTMTY---GGVVLVNFLNVYGPGLA 491

  Fly   554 LLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNFYWMFCWKYLSPCAMVTILLAS---FYQLLT 615
            :|.:...|...:.:.|||.|||.|:|.|.||:|..:|..||.|:||..::||.:.|   :.::|.
  Fly   492 ILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIMGYKEMLG 556

  Fly   616 EGSSYPAWIGSKGATEGMEWPHWCIVVAFFLILSSILWIPIVAVLRL-------CGIKVVEDSDP 673
            |...||.|....|      |...|         ||:|.||:..:.:.       |..::.|...|
  Fly   557 EEYYYPDWSYQVG------WAVTC---------SSVLCIPMYIIYKFFFASKGGCRQRLQESFQP 606

  Fly   674 AWFPEAELREVHGIVP--------HEPTELE-------RSIFCFNMD-------------GTEGM 710
            .       .....:||        |:..::.       .||..:|::             |.||.
  Fly   607 E-------DNCGSVVPGQQGTSVXHDHAQVHVNIRTSCTSIKIYNLNCSSNSNSLSPTTSGAEGR 664

  Fly   711 CC 712
            .|
  Fly   665 SC 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 211/567 (37%)
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 215/589 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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