DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10804 and slc6a22.1

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_005166076.1 Gene:slc6a22.1 / 368923 ZFINID:ZDB-GENE-030616-629 Length:584 Species:Danio rerio


Alignment Length:610 Identity:212/610 - (34%)
Similarity:308/610 - (50%) Gaps:92/610 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 ELEQDPPPFGSEASTSKAKAELVAIATASADQQDIVEGEKEGEERESWDSKIMFLLATIGYAVGL 138
            |::.||.               :....|.:|.|....|.|. :.|..|.||:.|:||..|..:||
Zfish     2 EIQHDPD---------------LQFKLAYSDAQSNETGLKT-QIRGQWSSKVEFILAVAGQIIGL 50

  Fly   139 GNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAIGQRLRKGAIGVWSQVSPYLGGIGIS 203
            |||||||||..|||||.|.:||.:.|...|||:|.:|.|:||...:|::..|.::.|...|:|..
Zfish    51 GNVWRFPYLCYKNGGGVFFIPYVVFLFACGIPLFLMETALGQYTSQGSVTCWRKICPLFEGLGYG 115

  Fly   204 SAVVSYIVALYYNTIIAWCLIYLLHSFESPLPWADCPTRLYKNFTYDHEPECV------------ 256
            |.||....:.||..|:||...||..||...||||.|     :|:.  :...||            
Zfish   116 SQVVVLYSSAYYIIILAWAFFYLFSSFSGELPWASC-----RNWW--NSENCVEFDRMQGAKNLS 173

  Fly   257 ----ASSPTQFYWYRTTLQCSESVDMPENFNYHMAIALIVSWFLVYICMVQGITSSGKIVYMTAI 317
                ||||.:.:|.|..|..:.||:...:..:.:|:.|:::|.:.|.|:.:|:.|:||:||.||.
Zfish   174 FMANASSPVKEFWERRVLNITGSVNELGSVRWELALCLLLAWVICYFCVWKGVKSTGKVVYFTAT 238

  Fly   318 FPYVVLIIFFFRGITLKGAADGVAHLFTPRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYN 382
            ||||:|::...||:||.||.||:.....|....|.||.||::||||||:|..|..|.|.|..|||
Zfish   239 FPYVMLMVLLIRGLTLPGAIDGITFYLYPNPARLADPQVWMDAGTQIFYSYALCIGCLTALGSYN 303

  Fly   383 PANNNCYRDAILVSLTNCGTSMFAGVVVFSVIGFKATATFDRCTEERN---GLVAQNKTHNLPVC 444
            ..|||||:|.:.:.|.|.|||..||..:|||:||.|.        |:.   .:||:         
Zfish   304 KYNNNCYKDCVYLCLLNSGTSFVAGFAIFSVLGFMAL--------EQGVDISVVAE--------- 351

  Fly   445 DLQTELANSASGTGLAFIIFTEAINQFPGAQLWAVLFFLMLFTLGIDSQFGTLEGVVTSLVDMKL 509
                      ||.|||||.:..|:...|.||||::.||||:..||:||:|..||.::|::.||. 
Zfish   352 ----------SGPGLAFIAYPRAVAMMPMAQLWSICFFLMIILLGLDSEFVGLESLMTAITDMN- 405

  Fly   510 FPNL-----PKEYIVGALCFSCCTISMCFANGAGSYIFQLMDSFA-GNFPLLIIALFECLSISYI 568
             ||.     .::..:..:|.:|..|.:......|.|:|||.|.:: ....||:.|:.:.:.|.:.
Zfish   406 -PNFFLQGHRRKLFLLVICIACFLIGLLMVTEGGLYVFQLFDYYSCSGMTLLLFAIAQSICIGWF 469

  Fly   569 YGVRRFSDDIEMMTGSRPNFYWMFCWKYLSPCAMVTILLASFYQL--LTEGSSYPAWIGSKGATE 631
            ||..|..::|..|.|..|.....:||||::|...:...:.|..:.  |...::|           
Zfish   470 YGADRLYENIADMIGYHPLTLMKYCWKYITPIVCIGTFIFSLVKFTPLKFNNTY----------- 523

  Fly   632 GMEWPHWCIVVAFFLILSSILWIPI 656
              |:|.|.....::..|||.|.:||
Zfish   524 --EYPWWGYAAGWWFTLSSTLLVPI 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 203/564 (36%)
slc6a22.1XP_005166076.1 SLC6sbd-TauT-like 30..569 CDD:271387 204/566 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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