DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10804 and Slc6a3

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_036826.1 Gene:Slc6a3 / 24898 RGDID:3715 Length:619 Species:Rattus norvegicus


Alignment Length:602 Identity:231/602 - (38%)
Similarity:329/602 - (54%) Gaps:75/602 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 EGEERESWDSKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAI 178
            |.:|||:|..||.|||:.||:||.|.||||||||..|||||||||||.:.:.|.|:|:||:|||:
  Rat    56 EAQERETWSKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMVIAGMPLFYMELAL 120

  Fly   179 GQRLRKGAIGVWSQVSPYLGGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESPLPWADCPTRL 243
            ||..|:||.||| ::.|.|.|:|.:..::|:.|..:||.||||.|.|...||...|||..|    
  Rat   121 GQFNREGAAGVW-KICPVLKGVGFTVILISFYVGFFYNVIIAWALHYFFSSFTMDLPWIHC---- 180

  Fly   244 YKNFTYDHEPEC-----------------VASSPTQFYWYRTTLQCSES--VDMPENFNYHMAIA 289
              |.|: :.|.|                 ..::|...|:.|..|...:|  :|......:.:...
  Rat   181 --NNTW-NSPNCSDAHASNSSDGLGLNDTFGTTPAAEYFERGVLHLHQSRGIDDLGPPRWQLTAC 242

  Fly   290 LIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGITLKGAADGVAHLFTPRWETLLDP 354
            |::...|:|..:.:|:.:|||:|::||..|||||.....||:||.||.||:....:..:..|.:.
  Rat   243 LVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGAMDGIRAYLSVDFYRLCEA 307

  Fly   355 VVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAILVSLTNCGTSMFAGVVVFSVIGFKAT 419
            .||::|.||:.||||:.||.||||||||...||||||||:.:..|..||..:|.||||.:|:.| 
  Rat   308 SVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIITTSINSLTSFSSGFVVFSFLGYMA- 371

  Fly   420 ATFDRCTEERNGLVAQNKTHNLPVCDLQTELANSASGTGLAFIIFTEAINQFPGAQLWAVLFFLM 484
                             :.||:|:.|:.|:      |.||.|||:.|||...|.:..||.:||||
  Rat   372 -----------------QKHNVPIRDVATD------GPGLIFIIYPEAIATLPLSSAWAAVFFLM 413

  Fly   485 LFTLGIDSQFGTLEGVVTSLVD-MKLFPNLPKEYIVGALCFSCCTISMCFANGAGSYIFQLMDSF 548
            |.||||||..|.:|.|:|.||| .:|.....:.:.:|.:..:......|..|| |.|:|.|:|.|
  Rat   414 LLTLGIDSAMGGMESVITGLVDEFQLLHRHRELFTLGIVLATFLLSLFCVTNG-GIYVFTLLDHF 477

  Fly   549 AGNFPLLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNFYWMFCWKYLSPCAMVTILLASFYQL 613
            |....:|...|.|.:.:::.|||::|||||:.|||.|||.||..|||.:|||.::.:::.|.  :
  Rat   478 AAGTSILFGVLIEAIGVAWFYGVQQFSDDIKQMTGQRPNLYWRLCWKLVSPCFLLYVVVVSI--V 540

  Fly   614 LTEGSSYPAWIGSKGATEGMEWPHWCIVVAFFLILSSILWIPIVAVLRLCGIKVVEDSDPAWFPE 678
            ......|.|:|          :|.|...:.:.:..||:..:||.|..:.|.:       |..|.|
  Rat   541 TFRPPHYGAYI----------FPDWANALGWIIATSSMAMVPIYATYKFCSL-------PGSFRE 588

  Fly   679 AELREVHGIVPHEPTEL 695
               :..:.|.|.:..:|
  Rat   589 ---KLAYAITPEKDHQL 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 220/560 (39%)
Slc6a3NP_036826.1 SLC6sbd_DAT1 60..613 CDD:212083 229/598 (38%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589 9/38 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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