DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10804 and Slc6a1

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_848818.1 Gene:Slc6a1 / 232333 MGIID:95627 Length:599 Species:Mus musculus


Alignment Length:609 Identity:239/609 - (39%)
Similarity:351/609 - (57%) Gaps:73/609 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 ATNQGFMSDAFDESSELEQDPPPFGSEASTSKAKAELVAIATASADQQDIVEGEKEGEERESWDS 123
            ||:...::|. ..|:|:.:.|      .::.|.|..:|.:...:.|..|          |::|..
Mouse     2 ATDNSKVADG-QISTEVSEAP------VASDKPKTLVVKVQKKAGDLPD----------RDTWKG 49

  Fly   124 KIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAIGQRLRKGAIG 188
            :..||::.:|||:|||||||||||..||||||||:|||:.|...|:|:|.||.::||....|.:|
Mouse    50 RFDFLMSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLG 114

  Fly   189 VWSQVSPYLGGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESPLPWADCPT-----RLYKNFT 248
            || :::|...|:|:::||:|:.:.:||..||:|.:.||.:||.:.|||..|..     |.:.|::
Mouse   115 VW-KLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNPWNTDRCFSNYS 178

  Fly   249 YDHEPECVASSPTQFYWYRTTLQCSESVDMPENFNYHMAIALIVSWFLVYICMVQGITSSGKIVY 313
            ..:... :.|:..:| |.|...|.::.:|.|....:.:||.|.::|.|||.|:.:|:..:||:||
Mouse   179 LVNTTN-MTSAVVEF-WERNMHQMTDGLDKPGQIRWPLAITLAIAWVLVYFCIWKGVGWTGKVVY 241

  Fly   314 MTAIFPYVVLIIFFFRGITLKGAADGVAHLFTPRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAF 378
            .:|.:||::|||.||||:||.||.:|:....||.:..|.|..|||:|.||||||.||..|.|||.
Mouse   242 FSATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGLGSLIAL 306

  Fly   379 SSYNPANNNCYRDAILVSLTNCGTSMFAGVVVFSVIGFKATATFDRCTEERNGLVAQNKTHNLPV 443
            .|||..:||.|||:|:|...|..||||||.|:||::||.|..|      :|:            :
Mouse   307 GSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVT------KRS------------I 353

  Fly   444 CDLQTELANSASGTGLAFIIFTEAINQFPGAQLWAVLFFLMLFTLGIDSQFGTLEGVVTSLVDMK 508
            .|:      :|||.||||:.:.||:.|.|.:.|||:|||.||..|||||||.|:||.:|:|||. 
Mouse   354 ADV------AASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDE- 411

  Fly   509 LFPNL---PKEYIVGALCFSCCTISMCFANGAGSYIFQLMDSF-AGNFPLLIIALFECLSISYIY 569
             :|.|   .:|..:.|:|.....|.:......|.|:|:|.|.: |....||.:..|||:|||:.|
Mouse   412 -YPRLLRNRRELFIAAVCIVSYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFY 475

  Fly   570 GVRRFSDDIEMMTGSRPNFYWMFCWKYLSPCAMVTILLASFYQL--LTEGS-SYPAWIGSKGATE 631
            ||.||.|:|:.|.||||..:|..||.:.:|..:..:.|.|..|:  ||.|| .:|.|      .:
Mouse   476 GVNRFYDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFLFSAVQMTPLTMGSYVFPKW------GQ 534

  Fly   632 GMEWPHWCIVVAFFLILSSILWIP 655
            |:.|         .:.|||::.||
Mouse   535 GVGW---------LMALSSMVLIP 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 227/548 (41%)
Slc6a1NP_848818.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 6/27 (22%)
SLC6sbd_GAT1 2..599 CDD:212075 239/609 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599
PDZ-binding 597..599
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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