DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10804 and snf-10

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_505682.2 Gene:snf-10 / 191769 WormBaseID:WBGene00004909 Length:673 Species:Caenorhabditis elegans


Alignment Length:626 Identity:136/626 - (21%)
Similarity:241/626 - (38%) Gaps:142/626 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 SEASTSKAKAELVAIATASADQQDIVEGEKEGE--------------------------ERESWD 122
            ||.:|..|..|.|.....|...::|:..:|...                          |..:|.
 Worm    17 SEETTRSASNETVNDDNRSTTTEEIIPIKKTSNATAISNIGFKSVTNLALENIGLDTKMEGPTWT 81

  Fly   123 SKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLC--IQGIPIFYLELAIGQRLRKG 185
            ||...:.||:.:....||:|.||||....||   ..||....|  ...:|:.|||.|:||.....
 Worm    82 SKWEAITATLSFVTCSGNIWFFPYLCGYYGG---WFPYQFTFCYVFIAVPLLYLETALGQYASAS 143

  Fly   186 AIGVWSQVSPYLGGIGISSAVVSYIVALYYNTIIAWCLIYLL------HSFESPLPWADCPTRLY 244
            .:.|:|:::|.:.|:   ||.:.:|:.....::..|.:..|.      .|..|..||..|.....
 Worm   144 PLSVFSRMAPAMAGL---SAGMCFIMVFRTISLSVWAIYDLTIFTHASQSIWSTSPWESCQESQS 205

  Fly   245 KNFTYDH-------------EPEC-------VASSPTQ-----FYWYRTTLQCSESVDM-----P 279
            .::..::             :.||       :|:...|     |..:...|....|:.|     |
 Worm   206 GDYCVNYKLSSKCTWIQPGSDKECDEYQEMLIATRGFQQRKSPFMSFVHGLMYKRSITMNDWEPP 270

  Fly   280 ENFNYHMAIALIVSWFLVYICMVQGITSSGK--IVYMTAIFPYVVLIIFFFRGITLKGAADGVAH 342
            ...:...|:.|   |.::.|..:.|....|:  ||.:|.:....::::.:  |::|    :...:
 Worm   271 SVTSIICAVCL---WIIIGIISIGGSKVLGRTGIVALTLLLVGTIMLLSY--GMSL----NDTTN 326

  Fly   343 LFT----------PRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAILVSL 397
            :||          .:|..:..   |.:|......:|.:..||:..|:|.|..:|..:||.:|:|:
 Worm   327 VFTAFFYQSEGYEDKWMWVWS---WADAAAHALRALNVGCGGIQKFASLNNFHNKIHRDVLLISI 388

  Fly   398 TNCGTSMFAGVVVFSVIGFKATATFDRC------TEERNGLVAQNKTHNLPVCDLQTELANSASG 456
            .:     |...:...::.|...|...|.      ..||..|.|........:.::   |.||:.|
 Worm   389 VS-----FVFYICTGLLSFMFMAEIGRLYYPDLEASERIQLYATPVMIESVISEI---LTNSSMG 445

  Fly   457 TGLAFIIFTEAINQFPGAQLWAVLFFLMLFTL---GIDSQFGTLEGVVTSLVD------MKLFPN 512
            :                  :|..||:|.|...   ||.|....:..::...::      .|...:
 Worm   446 S------------------IWVFLFWLTLAACSIQGISSYIWVISSMIVERLNGSRRKYGKALAS 492

  Fly   513 LPKEYIVGALCFSCCTI-SMCFANGAGSYIFQLMDSFAGNFPLLIIALFECLSISYIYGVRRFSD 576
            ..|..|:.|:......| |:.|....|..:...:::|| ::..:.||..|.:::||:||.:|||.
 Worm   493 WHKRAIILAIMSVTGLISSLPFLGNGGINLMSSIETFA-SYGTIFIAFVEVITVSYVYGFKRFSV 556

  Fly   577 DIEMMTGSR--PNFYWMFCWKYLSPCAMVT---ILLASFYQ 612
            :|..|.|..  ||.:|...|..:||..::.   .::|:|.|
 Worm   557 NIRAMIGGHGPPNVFWWLNWLVISPILLIVTFGCIVATFGQ 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 126/564 (22%)
snf-10NP_505682.2 SNF 78..628 CDD:264495 126/565 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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