DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10804 and snf-12

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_509527.1 Gene:snf-12 / 181143 WormBaseID:WBGene00004911 Length:1022 Species:Caenorhabditis elegans


Alignment Length:774 Identity:180/774 - (23%)
Similarity:321/774 - (41%) Gaps:172/774 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LRRQSSRDIILKSQKSIDQ--LELRELRGRLVSKEHGVSHHHHTSLHHQPLYGATNQGFMSDAFD 70
            |.|:||.|.|.|....:|:  ::||||.|   |..:..:..:...:.|.               |
 Worm    22 LHRKSSVDEIKKRTVDMDKRIVKLRELVG---SSANDAALFYLECVCHA---------------D 68

  Fly    71 ESSELEQDPPPFGSEASTSKAKAE------------------------LVAIATASADQQ----- 106
            |:..|.......|.|....|.|.:                        :..|..::.:.|     
 Worm    69 ETERLLNRGSSVGKEKKWKKVKRKTSSSVAPPLSRTISSLPGVSSPDVIQTIDVSALEDQTPQRP 133

  Fly   107 ------------DIVEGEKEGEERESWDSKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVP 159
                        |::...|:.:.||.|.::..|.|:.:|:.||:|:..|||....::|||.|.:|
 Worm   134 HWWDQFQLYRRTDLLRFSKQNDRRELWRTQKDFFLSCLGFMVGVGHTMRFPAKVYQHGGGVFFIP 198

  Fly   160 YFIMLCIQGIPIFYLELAIGQRLRKGAIGVWSQVSPYLGGIGISSAVVSYIVALYYNTIIAWCLI 224
            |...|...|:|:.:|.|::||...:.|...:.::.|...|:|.:..|::..||:|||.|:||.:.
 Worm   199 YLFSLIFFGLPLVFLHLSLGQYTGQAANTAFQRLMPIGSGVGWALVVIAIPVAVYYNIIVAWAIH 263

  Fly   225 YLLHSFE-----SPLPWADCPTRLYKNFTYDHEPECVASSPTQFYWYRTTLQCSESVDMPENFNY 284
            |...|.:     ..|||..|...      :..:..|     ...:...:....:.|:..||.|.:
 Worm   264 YFFQSAKGLLLGDELPWETCRDE------WQLDNRC-----CNLHNLHSCFNSTNSITAPEAFFH 317

  Fly   285 -------------------HMAIALIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRG 330
                               |:.::|..:|.||:..:.:|:.|..:.:.:||..||::|.|...||
 Worm   318 SEVLSLSTFGDFALGPLQSHLVLSLAAAWLLVFFGVFKGLGSIAQTMNVTATVPYLLLSILLLRG 382

  Fly   331 ITLKGAADGVAHLFTP------RWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCY 389
            |:|.||..|:..|||.      :|:      :|..|..|:|:.||:..|.||:.::::...||.|
 Worm   383 ISLPGANKGLTFLFTVDSTKLWKWQ------IWKSAAEQVFYELGIDAGPLISMAAFSRYRNNIY 441

  Fly   390 RDAILVSLTNCGTSMFAGVVVFSVIGFKATATFDRCTEERNGLVAQNKTHNLPVCDLQTELANSA 454
            ||::|:.:.:..||..:|:|:||.:||.|:        |.|..|.....|: |:.          
 Worm   442 RDSVLLVIMDALTSCLSGMVIFSFVGFIAS--------ESNSNVNDVLKHD-PLY---------- 487

  Fly   455 SGTGLAFIIFTEAINQFPGAQLWAVLFFLMLFTLGIDSQFGTLEGVVTSLVDMKLFPNLPKE-YI 518
                |:|.::....:......|||.|||.||....||::|..||.:.::.::.....|...| .:
 Worm   488 ----LSFTVYPGVTSFMYWGGLWATLFFGMLVLAAIDAEFAWLEMIASAFMNHFSMKNKAVENRL 548

  Fly   519 VGALCFSCCTISMCFANGAGSYIFQLMDSFAGNFPLLIIALFECLSISYIYGVRRFSDDIEMM-- 581
            :..||.:...:.:......|.::|..:::...|:....:||.....:.|:||:..:..||..|  
 Worm   549 LAFLCLAGFFLGLPLCAQGGIFVFHAIENLNANWNSFSLALLSVAIVCYVYGIDNYLTDISAMLR 613

  Fly   582 ---------TGSRPNFYWMF-----------CWKYLSPCAMVTILLASF--YQLLTEGSSYPAWI 624
                     |..:....:.|           |  ::.|..:..:|:||.  ||.:          
 Worm   614 VPRIQISKATRLKEKLIYFFGPGGIYIKFSLC--FICPVILTVLLVASVLGYQRI---------- 666

  Fly   625 GSKGATEGMEWPHWCIVVAFFLILSSILWIPIVAVLRLCGIKVVEDSDPAWFPEAELRE 683
                :..|...|....:||:.:::..:|.:|:||.:::..|:.......:.|..:|.||
 Worm   667 ----SFAGRPIPIDYEIVAWIVMIGPLLVVPLVAFMQIRQIRNEGKLLKSLFDTSEWRE 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 147/595 (25%)
snf-12NP_509527.1 SLC6sbd 158..660 CDD:271359 137/543 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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