DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10804 and snf-5

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_496735.1 Gene:snf-5 / 174923 WormBaseID:WBGene00004904 Length:728 Species:Caenorhabditis elegans


Alignment Length:660 Identity:179/660 - (27%)
Similarity:291/660 - (44%) Gaps:120/660 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 TNQGFMSDAFDESSELEQDPPPFGSEASTSKAKAELVAIATASADQQDIVEGEKEGEERESWDSK 124
            :||.....:..:|::.:.||....::.:|          .|.:....| ...|:|.|:|:.:.:.
 Worm    35 SNQLSSQKSIQQSTQSKIDPSRIDTKNTT----------VTTTRPTLD-TPPEEEEEKRDGFGNS 88

  Fly   125 IMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAIGQRLRKGAIGV 189
            ..|:|.::|.||||||:||||..|..|||.|||:||.....:.|:|..|.|...||...|....:
 Worm    89 FEFVLTSLGLAVGLGNIWRFPTRAYNNGGSAFLIPYLTCAFLFGLPAVYFEFLTGQYQGKSPPVI 153

  Fly   190 WSQVSPYLGGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESPLP-WADCPTRLYKNFTYDHEP 253
            :.:|.|.|.|:|.....|:.:||:||..|::|..||:::....... |:.|      |..:::..
 Worm   154 FRRVRPILEGVGWMGVFVAALVAIYYIVIVSWISIYMINICRGHFALWSHC------NNDWNNGT 212

  Fly   254 ECVASS------------------------PTQFYWYRTTLQCSESVDM--------------PE 280
            .|:..:                        |.:..::....|.:...|:              |.
 Worm   213 SCITMADQYLCKNHTKVMANSTLWNSSLPIPDKMVYFNGACQDANGTDVSTATEQYFMTYIVQPS 277

  Fly   281 N-------FNYHMAIALIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGITLKGAAD 338
            :       ||:.:..|:.|.|.|..:.:::|....|||.|::.:.|||::::.|..|:...|:..
 Worm   278 SGMLDFGGFNWPVFAAMSVCWLLTGLGILKGAKIMGKISYVSVLVPYVLVVVLFINGVFQDGSGV 342

  Fly   339 GVAHLF-TPRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAILVSLTNCGT 402
            |:...| ||.:..|.:...|.||..|:.|||.:..||||:.|||:|..||.:|||::|.:.:...
 Worm   343 GLEMYFGTPNYTKLYEQDTWTEALKQLCFSLSVGHGGLISLSSYSPKRNNIFRDALIVIIGDTTM 407

  Fly   403 SMFAGVVVFSVIGFKATATFDRCTEERNGLVAQNKTHNLPVCDLQTELANSASGTGLAFIIFTEA 467
            |:..|..||:.:|:.|.||                  ...|.|:      ..||..|||:::.||
 Worm   408 SLVGGGAVFATLGYLAKAT------------------GQDVKDV------VKSGLSLAFVVYPEA 448

  Fly   468 INQFPGAQLWAVLFFLMLFTLGIDSQFGTLEGVVTSLVDMKLFPNL--PKEYIVGALCFSCCTIS 530
            :.:.|...||..:||||||.||..::...::...:.:.|.  :|..  .|..:|.|.|.....|.
 Worm   449 MTRMPVPWLWCFIFFLMLFLLGASTEIALVDVFCSCIYDQ--YPRFRNRKWIVVIAWCSVLYCIG 511

  Fly   531 MCFANGAGSYIFQLMDSFAGNFPLLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNFY------ 589
            :.|:..||.|.|::.|.:|..|..:...:.|.|.:.||||.|...|||..:.|...|.:      
 Worm   512 LVFSTRAGYYWFEMFDEYAAGFSSVCTVVCELLVMMYIYGFRNVRDDITEVVGHARNKFTGAIGA 576

  Fly   590 --WMFC--WKYLSPCAMVTILLASF---YQLLTEGSSYPAWIGSKGATEGMEWPHW------CIV 641
              |.|.  |..:||...:.::..||   |..:.....|||.....|         |      .|:
 Worm   577 HSWYFTANWMVISPSIALILVGLSFVREYPYMGRHDIYPAVFDIFG---------WFLSFLPVII 632

  Fly   642 VAFFLILSSI 651
            |..|::|:.|
 Worm   633 VPIFMLLNFI 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 167/600 (28%)
snf-5NP_496735.1 SLC6sbd 83..601 CDD:271359 154/549 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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