DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10804 and snf-1

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_491491.2 Gene:snf-1 / 172119 WormBaseID:WBGene00004900 Length:617 Species:Caenorhabditis elegans


Alignment Length:622 Identity:142/622 - (22%)
Similarity:243/622 - (39%) Gaps:138/622 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 DIVEGEKEGEERESWDSKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPI 171
            |:||     |.|:.|.|||.|:::.:.|...:.|....|.|..:|||.||...|.|::.:..:|.
 Worm    15 DLVE-----EWRDLWPSKIEFIVSAMAYLFAMTNFLNLPKLILENGGVAFAAAYAIVVGVLCMPT 74

  Fly   172 FYLELAIGQRLRKGAIGVWSQVSPYLGGIGISSAVVSYIVALYYNTIIAWCLIYL------LHSF 230
            ..:|::|||...:..:..:..:.|...|||:|..:.:.:|.......::...::|      .|:.
 Worm    75 MVMEMSIGQVTGRAPVLAFYHLFPVFRGIGVSQILFTMVVLACMTKFLSTLCLFLYYYFWTFHAG 139

  Fly   231 ESPLPWADCPTRLYKNFTYDHEPECVA-------------------------SSPTQFYWYRTTL 270
            .|.|||.:|     |.|     ||.|:                         ||..||.   |||
 Worm   140 RSGLPWLNC-----KAF-----PEFVSQPCREAGSITNITQINNRLNTIQAESSMMQFL---TTL 191

  Fly   271 Q-CSESVDMPENFNYHMAIALIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGITLK 334
            : .|||:...::|.|.:.||....|..:::.:..|:...||.|....:..:..|::||.|..||.
 Worm   192 ERPSESIADFKDFQYPILIAQGAIWIAIFVAICFGVRFVGKTVAFVLMLAFSSLLVFFLRSATLG 256

  Fly   335 GAADGVAHLF--TPRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAILVSL 397
            |..: :..::  ...||.|.|..||..|..|.....|:.:|..|..|||...:||...|:|.:|:
 Worm   257 GVTE-ILEIYWKATDWEKLADYQVWRLAIEQAILGTGIGYGAFITMSSYMKRSNNLVCDSIFLSV 320

  Fly   398 TNCGTSMFAGVVVFSVIGFKATATFDRCTEERNGLVAQNKTHNLPVCDLQTELANSASGTGLAFI 462
            .:...|....:.:..::|:               |..:...|       .|||..:...      
 Worm   321 WHLIISFVQTMSIICIVGY---------------LSMKLGIH-------PTELLETGED------ 357

  Fly   463 IFTEAINQFPGAQLWAVLFFL---------MLFTLGIDSQFGTLEGVVTSLVDMKLFPNLPKE-- 516
                        |:|.:|.::         :|.|:.|.:.|..:  .:.:|..:..|.:...|  
 Worm   358 ------------QMWYMLAYVSYLPKLWSGVLLTICICTMFSVI--TILALSVLSTFEDAFGENW 408

  Fly   517 -------YIVGALCFSCCTISMCFANGAGSYIFQLMDSFAGNFPLLIIALFECLSISYIYGVRRF 574
                   ::...:|..|..:::.||..||.:.::|.........:..|...|..:.::.|...:.
 Worm   409 SKCCRRFFLALFVCLFCFGLTVYFATNAGRHAYELATRSIKYCTIYFILTAELFATAWFYCAHKL 473

  Fly   575 SDDIEMMTGSR-----PNFYWMFCWKYLSPC--AMVTILLASFYQLLTEGSSYPAWIGSKGATEG 632
            ..|:..|..||     .:|:..|  .||.|.  |.|..|.|..|:.    ||:.|.|        
 Worm   474 GKDLHNMMRSRCCSCFGHFFLYF--TYLLPILPAGVAFLNALDYKF----SSFSAPI-------- 524

  Fly   633 MEWPHWCIVVAFFLILSSILWIPI---VAVLRLCGIK 666
            .|| .:...|...:.:..::.||:   :.:|..|..|
 Worm   525 HEW-KYSEYVGIAIAMVPLIPIPLYFFMTILCACCCK 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 134/602 (22%)
snf-1NP_491491.2 SNF 21..554 CDD:264495 135/603 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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