DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10804 and Slc6a13

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_006237280.2 Gene:Slc6a13 / 171163 RGDID:620788 Length:608 Species:Rattus norvegicus


Alignment Length:652 Identity:220/652 - (33%)
Similarity:325/652 - (49%) Gaps:128/652 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 EKEGE-ERESWDSKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIFYLE 175
            |::|. |||.|.:|:.|:|:..|..:|||||||||||..|||||||.:||.|.|...|||:|:||
  Rat    25 EEDGTLEREQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYLIFLFTCGIPVFFLE 89

  Fly   176 LAIGQRLRKGAIGVWSQVSPYL------GGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESPL 234
            .|:||...:|.|..|.::.|..      .|||.:|.::..::.:||..::||.|.||..||.:.|
  Rat    90 TALGQYTNQGGITAWRKICPIFEASVPSPGIGYASQMIVSLLNVYYIVVLAWALFYLFSSFTTDL 154

  Fly   235 PWADCPTRLYKNFTYDHE---PECV---------------ASSPTQFYWYRTTLQCSESVDMPEN 281
            ||..|          .||   ..||               |:||...:|.|..|:.|:.:....:
  Rat   155 PWGSC----------SHEWNTENCVEFQKTNNSLNVTSENATSPVIEFWERRVLKISDGIQHLGS 209

  Fly   282 FNYHMAIALIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGITLKGAADGVAHLFTP 346
            ..:.:.:.|:::|.:.|.|:.:|:.|:||:||.||.|||::|::...||:||.|||.|:.....|
  Rat   210 LRWELVLCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLVVLLIRGVTLPGAAQGIQFYLYP 274

  Fly   347 RWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAILVSLTNCGTSMFAGVVVF 411
            ....|.||.||::||||||||..:..|.|.|..|||..:||||||.:.:.:.|..||..||..:|
  Rat   275 NITRLWDPQVWMDAGTQIFFSFAICLGCLTALGSYNKYHNNCYRDCVALCILNSSTSFVAGFAIF 339

  Fly   412 SVIGFKATATFDRCTEERNGLVAQNKTHNLPVCDLQTELANSASGTGLAFIIFTEAINQFPGAQL 476
            |::||                  .::...:|:.::      :.||.|||||.:..|:...|.:.|
  Rat   340 SILGF------------------MSQEQGVPISEV------AESGPGLAFIAYPRAVVMLPFSPL 380

  Fly   477 WAVLFFLMLFTLGIDSQFGTLEGVVTSLVDMKLFPNLPKE--------YIVGALCFSCCTISMCF 533
            ||..||.|:..||:||||..:|.:||:||||  :|.:.::        .||..:.|   .|.:..
  Rat   381 WACCFFFMVVLLGLDSQFVCVESLVTALVDM--YPRVFRKKNRREILILIVSVVSF---FIGLIM 440

  Fly   534 ANGAGSYIFQLMDSFAGN-FPLLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNFYW---MFCW 594
            ....|.|:|||.|.:|.: ..||.:|:||.|.::::||..||.|:||.|.|.:|   |   .:||
  Rat   441 LTEGGMYVFQLFDYYAASGMCLLFVAIFESLCVAWVYGASRFYDNIEDMIGYKP---WPLIKYCW 502

  Fly   595 KYLSPCAMVTILLASF--YQLLTEGSSYPAWIGSKGATEGMEWPHWCIVVAFFLILSSILWIPIV 657
            .:.:|...:...|.|.  |..||....|             .:|.|...:.:.|.|||::.||..
  Rat   503 LFFTPAVCLATFLFSLIKYTPLTYNKKY-------------TYPWWGDALGWLLALSSMVCIPAW 554

  Fly   658 AVLRLCGIKVVEDSDPAWFPEAELREVHGIVPHEPTELERSIFCFNMDGTEGMCCPKYGLPEKSL 722
            ::.:|..:|            ..|||          .|.:            :.||...||:||.
  Rat   555 SIYKLRTLK------------GPLRE----------RLRQ------------LVCPAEDLPQKSQ 585

  Fly   723 EE 724
            .|
  Rat   586 PE 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 202/578 (35%)
Slc6a13XP_006237280.2 SLC5-6-like_sbd 32..581 CDD:382020 212/637 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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