DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10804 and Slc6a4

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_034614.2 Gene:Slc6a4 / 15567 MGIID:96285 Length:630 Species:Mus musculus


Alignment Length:634 Identity:237/634 - (37%)
Similarity:352/634 - (55%) Gaps:90/634 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 GSEA--STSKAKAELVAIATASADQQDIVEGEKEGEERESWDSKIMFLLATIGYAVGLGNVWRFP 145
            |.||  ||..|...|||         :|.:|     |||:|..|:.|||:.|||||.|||:||||
Mouse    56 GDEAPHSTPAATTTLVA---------EIHQG-----ERETWGKKMDFLLSVIGYAVDLGNIWRFP 106

  Fly   146 YLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAIGQRLRKGAIGVWSQVSPYLGGIGISSAVVSYI 210
            |:..:|||||||:||.||....|||:||:|||:||..|.|.|.:|.::.|...|||.:..::::.
Mouse   107 YICYQNGGGAFLLPYTIMAIFGGIPLFYMELALGQYHRNGCISIWKKICPIFKGIGYAICIIAFY 171

  Fly   211 VALYYNTIIAWCLIYLLHSFESPLPWADCPTRLYKN----------FTYDHEPECV-ASSPTQFY 264
            :|.||||||||.|.||:.||...|||..|     ||          |..|:....: ::||.:.:
Mouse   172 IASYYNTIIAWALYYLISSFTDQLPWTSC-----KNSWNTGNCTNYFAQDNITWTLHSTSPAEEF 231

  Fly   265 WYRTTLQCSESVDMPE--NFNYHMAIALIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLIIFF 327
            :.|..||..:|..:.:  ..::.:|:.:::.:.::|..:.:|:.:|||:|::||.|||:||.:..
Mouse   232 YLRHVLQIHQSKGLQDLGTISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIVLSVLL 296

  Fly   328 FRGITLKGAADGVAHLFTPRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDA 392
            .||.||.||..||.....|.|:.||:..||::|..|||||||..||.|:||:|||..|||||:||
Mouse   297 VRGATLPGAWRGVVFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDA 361

  Fly   393 ILVSLTNCGTSMFAGVVVFSVIGFKATATFDRCTEERNGLVAQNKTHNLPVCDLQTELANSASGT 457
            ::.|:.||.||..:|.|:|:|:|:.|        |.||..|              :|:|..| |.
Mouse   362 LVTSVVNCMTSFVSGFVIFTVLGYMA--------EMRNEDV--------------SEVAKDA-GP 403

  Fly   458 GLAFIIFTEAINQFPGAQLWAVLFFLMLFTLGIDSQFGTLEGVVTSLVDMKLFPNL---PKEYIV 519
            .|.||.:.|||...|.:..:|::|||||.|||:||.|..||||:|:::|.  ||::   .:|:.|
Mouse   404 SLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSTFAGLEGVITAVLDE--FPHIWAKRREWFV 466

  Fly   520 GALCFSCCTISMCFANGAGSYIFQLMDSFAGNFPLLIIALFECLSISYIYGVRRFSDDIEMMTGS 584
            ..:..:|...|:......|:|:..|::.:|....:|.:||.|.:.:|:.||:.:|..|::.|.|.
Mouse   467 LIVVITCILGSLLTLTSGGAYVVTLLEEYATGPAVLTVALIEAVVVSWFYGITQFCSDVKEMLGF 531

  Fly   585 RPNFYWMFCWKYLSPCAMVTIL---LASFYQLLTEGSSYPAWIGSKGATEGMEWPHWCIVVAFFL 646
            .|.::|..||..:||..::.|:   |.|..||.....:|               |||.|::.:.:
Mouse   532 SPGWFWRICWVAISPLFLLFIICSFLMSPPQLRLFQYNY---------------PHWSIILGYCI 581

  Fly   647 ILSSILWIPIVAVLRLCGIKVVEDSDPAWFPEAELREVHGIVPHEPTEL 695
            ..||::.|||..:.||.       |.|....|   |.:..|.|..|||:
Mouse   582 GTSSVICIPIYIIYRLI-------STPGTLKE---RIIKSITPETPTEI 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 212/559 (38%)
Slc6a4NP_034614.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63 3/6 (50%)
5HT_transport_N 24..64 CDD:281488 4/7 (57%)
SLC6sbd_SERT 79..615 CDD:271399 221/590 (37%)
Interaction with RAB4A. /evidence=ECO:0000250 616..624 3/5 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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