DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10804 and Slc6a3

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_034150.1 Gene:Slc6a3 / 13162 MGIID:94862 Length:619 Species:Mus musculus


Alignment Length:602 Identity:231/602 - (38%)
Similarity:329/602 - (54%) Gaps:75/602 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 EGEERESWDSKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAI 178
            |.:|||:|..||.|||:.||:||.|.||||||||..|||||||||||.:.:.|.|:|:||:|||:
Mouse    56 EVQERETWSKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMVIAGMPLFYMELAL 120

  Fly   179 GQRLRKGAIGVWSQVSPYLGGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESPLPWADCPTRL 243
            ||..|:||.||| ::.|.|.|:|.:..::|:.|..:||.||||.|.|...||...|||..|    
Mouse   121 GQFNREGAAGVW-KICPVLKGVGFTVILISFYVGFFYNVIIAWALHYFFSSFTMDLPWIHC---- 180

  Fly   244 YKNFTYDHEPEC-----------------VASSPTQFYWYRTTLQCSES--VDMPENFNYHMAIA 289
              |.|: :.|.|                 ..::|...|:.|..|...:|  :|......:.:...
Mouse   181 --NNTW-NSPNCSDAHSSNSSDGLGLNDTFGTTPAAEYFERGVLHLHQSRGIDDLGPPRWQLTAC 242

  Fly   290 LIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGITLKGAADGVAHLFTPRWETLLDP 354
            |::...|:|..:.:|:.:|||:|::||..|||||.....||:||.||.||:....:..:..|.:.
Mouse   243 LVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGAMDGIRAYLSVDFYRLCEA 307

  Fly   355 VVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAILVSLTNCGTSMFAGVVVFSVIGFKAT 419
            .||::|.||:.||||:.||.||||||||...||||||||:.:..|..||..:|.||||.:|:.| 
Mouse   308 SVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIITTSINSLTSFSSGFVVFSFLGYMA- 371

  Fly   420 ATFDRCTEERNGLVAQNKTHNLPVCDLQTELANSASGTGLAFIIFTEAINQFPGAQLWAVLFFLM 484
                             :.||:|:.|:.|:      |.||.|||:.|||...|.:..||.:||||
Mouse   372 -----------------QKHNVPIRDVATD------GPGLIFIIYPEAIATLPLSSAWAAVFFLM 413

  Fly   485 LFTLGIDSQFGTLEGVVTSLVD-MKLFPNLPKEYIVGALCFSCCTISMCFANGAGSYIFQLMDSF 548
            |.||||||..|.:|.|:|.||| .:|.....:.:.:|.:..:......|..|| |.|:|.|:|.|
Mouse   414 LLTLGIDSAMGGMESVITGLVDEFQLLHRHRELFTLGIVLATFLLSLFCVTNG-GIYVFTLLDHF 477

  Fly   549 AGNFPLLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNFYWMFCWKYLSPCAMVTILLASFYQL 613
            |....:|...|.|.:.:::.|||::|||||:.|||.|||.||..|||.:|||.::.:::.|.  :
Mouse   478 AAGTSILFGVLIEAIGVAWFYGVQQFSDDIKQMTGQRPNLYWRLCWKLVSPCFLLYVVVVSI--V 540

  Fly   614 LTEGSSYPAWIGSKGATEGMEWPHWCIVVAFFLILSSILWIPIVAVLRLCGIKVVEDSDPAWFPE 678
            ......|.|:|          :|.|...:.:.:..||:..:||.|..:.|.:       |..|.|
Mouse   541 TFRPPHYGAYI----------FPDWANALGWIIATSSMAMVPIYATYKFCSL-------PGSFRE 588

  Fly   679 AELREVHGIVPHEPTEL 695
               :..:.|.|.:..:|
Mouse   589 ---KLAYAITPEKDRQL 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 220/560 (39%)
Slc6a3NP_034150.1 SLC5-6-like_sbd 60..613 CDD:294310 229/598 (38%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589 9/38 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.