DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10804 and slc6a6

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_017949178.2 Gene:slc6a6 / 100494063 XenbaseID:XB-GENE-991256 Length:616 Species:Xenopus tropicalis


Alignment Length:585 Identity:210/585 - (35%)
Similarity:315/585 - (53%) Gaps:82/585 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 EGEKEGE--ERESWDSKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIF 172
            |.|.:|:  :||.|.|||.|:|:..|..:|||||||||||..||||||||:||||.|...|:|:|
 Frog    31 EDEADGKPPQREKWASKIDFVLSVAGGFIGLGNVWRFPYLCYKNGGGAFLIPYFIFLFGGGLPVF 95

  Fly   173 YLELAIGQRLRKGAIGVWSQVSPYLGGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESPLPWA 237
            :||:.:||...:|.|..|.::.|...|||.:|.|:..::.:||..|:||.:.||..||:..||||
 Frog    96 FLEVVLGQFTSEGGITCWEKICPVFTGIGYASIVIVSLLNVYYIVILAWGVYYLFQSFQGQLPWA 160

  Fly   238 DCPTRLYKNFTYDHEP----ECVA------------------SSPTQFYWYRTTLQCSESVDMPE 280
            .|           |:|    .||.                  :||...:|....|..|:.:|...
 Frog   161 LC-----------HQPWNTESCVEDTFRKNWTMWMSMNSTNFTSPVTEFWEHKVLSLSKGIDDVG 214

  Fly   281 NFNYHMAIALIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGITLKGAADGVAHLFT 345
            ...:.:|:.|:::|.:.:.|:.:|:.|:||:||.||.||:::|::...||:||.|||:|:.....
 Frog   215 VLKWDLALCLLLTWVICFFCIWKGVRSTGKVVYFTATFPFIMLLVLLIRGVTLPGAAEGIKFYLY 279

  Fly   346 PRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAILVSLTNCGTSMFAGVVV 410
            |....|.||.||::||||||||..:..|.:.:..|||....|||||.:|:...|.|||..:|..:
 Frog   280 PDITRLADPQVWIDAGTQIFFSYAICLGAMTSLGSYNKYKYNCYRDCMLLGCLNSGTSFVSGFAI 344

  Fly   411 FSVIGFKATATFDRCTEERNGLVAQNKTHNLPVCDLQTELANSASGTGLAFIIFTEAINQFPGAQ 475
            |||:||.|                  :...:.:.|:      :.||.|||||.:.:|::..|...
 Frog   345 FSVLGFMA------------------QEQGVDIADV------AESGPGLAFIAYPKAVSMMPLPS 385

  Fly   476 LWAVLFFLMLFTLGIDSQFGTLEGVVTSLVDMKLFPNL-----PKEYIVGALCFSCCTISMCFAN 535
            .||:|||:||..||:||||..:||.:|||||  |:|:.     .:|..:..:||....:.:....
 Frog   386 FWAILFFIMLLLLGLDSQFVEVEGQITSLVD--LYPSFLRKGYRREIFIAVVCFLSYLLGLTMVT 448

  Fly   536 GAGSYIFQLMDSFAGN-FPLLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNFYWMFCWKYLSP 599
            ..|.|:|||.|.:|.: ..||.:|.|||::::::||..:|.|:||.|.|.:|..:..:.|..::|
 Frog   449 EGGMYVFQLFDYYAASGVCLLWVAFFECVAVAWVYGADKFYDNIEDMIGYKPGPWMKWSWTVITP 513

  Fly   600 --CAMVTILLASFYQLLTEGSSYPAWIGSKGATEGMEWPHWCIVVAFFLILSSILWIPIVAVLRL 662
              |....|...:.|..||....|             .:|.|.|.:.:.|.|||::.||:|.|..:
 Frog   514 LLCVACFIFSLAKYTPLTYNKYY-------------VYPDWAIGLGWVLALSSMICIPLVVVFHI 565

  Fly   663  662
             Frog   566  565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 205/570 (36%)
slc6a6XP_017949178.2 SLC6sbd_TauT 41..582 CDD:271398 207/575 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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