DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10804 and slc6a11b

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_017213744.2 Gene:slc6a11b / 100150472 ZFINID:ZDB-GENE-121116-2 Length:617 Species:Danio rerio


Alignment Length:627 Identity:223/627 - (35%)
Similarity:324/627 - (51%) Gaps:69/627 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 EQDPPPFGSEASTSKAKAELVAIATASADQQDIVEGEKEGEERESWDSKIMFLLATIGYAVGLGN 140
            |:..|....:|..|.........|..|.|::.:       .||..|::|:.|:|:..|..:||||
Zfish     4 EKSIPIINGKAEESMDPESANPSAVRSNDKKVV-------NERGQWNNKVEFVLSVAGEIIGLGN 61

  Fly   141 VWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAIGQRLRKGAIGVWSQVSPYLGGIGISSA 205
            |||||||..|||||||.|||.|.....|||:|:||.|:||...:|.|..|.:|.|...|||.::.
Zfish    62 VWRFPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYATQ 126

  Fly   206 VVSYIVALYYNTIIAWCLIYLLHSFESPLPWADCPTRLYKNFTYDHEPECVA-------SSPTQF 263
            |:...:.:||..|:||.:.||.:.|.:.||||.|..........|...|.:|       :||...
Zfish   127 VIEAHLNVYYVVILAWAIFYLFNCFTTELPWASCGHYWNTENCVDFNNESIANFTNPYSTSPVME 191

  Fly   264 YWYRTTLQCSESVDMPENFNYHMAIALIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFF 328
            :|.|..|:.|..::......:.:|:.|.::|.:.|.|:.:|..|:||:||:||.|||.:|:|...
Zfish   192 FWERRVLKISSGIEEVGGLRWELALCLAIAWVICYFCIWKGPKSTGKVVYVTATFPYFMLLILLL 256

  Fly   329 RGITLKGAADGVAHLFTPRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAI 393
            |||||.|||:|:.....|....|.||.||::||||||||..:..|.|.|..|||..|||||||.:
Zfish   257 RGITLPGAANGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLTALGSYNSYNNNCYRDCL 321

  Fly   394 LVSLTNCGTSMFAGVVVFSVIGFKATATFDRCTEERNGLVAQNKTHNLPVCDLQTELANSASGTG 458
            ::...|.|||..||..:|||:||.|                  ...|:|:      .|.:.||.|
Zfish   322 MLCCLNSGTSFVAGFAIFSVLGFMA------------------YEQNVPI------EAVAESGPG 362

  Fly   459 LAFIIFTEAINQFPGAQLWAVLFFLMLFTLGIDSQFGTLEGVVTSLVDMKLFPNLPKEYIVG--- 520
            ||||.:.:|:...|.|.|||.|||:||..||:||||..:|.:||::|||     .||.:.||   
Zfish   363 LAFIAYPKAVTMMPWAPLWAALFFMMLIFLGLDSQFVCVESLVTAIVDM-----YPKTFRVGYRR 422

  Fly   521 -----ALCFSCCTISMCFANGAGSYIFQLMDSFAGN-FPLLIIALFECLSISYIYGVRRFSDDIE 579
                 .:..:...:.:......|.|:|||.||:|.: ..||.:|:||.:.|.::||..||..:||
Zfish   423 ELLILGMSIASFFLGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGSDRFYLNIE 487

  Fly   580 MMTGSRPNFYWMFCWKYLSP--CAMVTILLASFYQLLTEGSSYPAWIGSKGATEGMEWPHWCIVV 642
            .|.|.:|.|:..:|||:.:|  |..:.:.....|:.|...:.|             .:|.|...:
Zfish   488 DMIGYKPIFFIKWCWKFFTPGICTGIFLFFLIKYKPLKYNNVY-------------TYPDWGYGI 539

  Fly   643 AFFLILSSILWIPIVAVLRLCGIKVV--EDSDPAWFPEAELR 682
            .:.:.:||::.||:..:.::...|..  |.......|.|:||
Zfish   540 GWMMAMSSMVCIPLGILFQIWKTKGTFRERIKKLTTPSADLR 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 208/558 (37%)
slc6a11bXP_017213744.2 SLC5-6-like_sbd 38..576 CDD:320982 212/579 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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