DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10804 and slc6a19

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001120585.1 Gene:slc6a19 / 100145739 XenbaseID:XB-GENE-5870378 Length:636 Species:Xenopus tropicalis


Alignment Length:605 Identity:263/605 - (43%)
Similarity:378/605 - (62%) Gaps:44/605 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 DQQDIVEGEKEGEERESWDSKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQG 168
            ::.:.:|.|:.| ||..||:|..::|..||:.||||||||||||.|.:|||||::|:.|:|..:|
 Frog    19 EELEKLETEEAG-ERPQWDNKAQYMLTCIGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVFEG 82

  Fly   169 IPIFYLELAIGQRLRKGAIGVWSQVSPYLGGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESP 233
            ||:.:||.|||||||||::||||.:.|.|.|:||:|.:||::|.|||||||||.:.|..:||:.|
 Frog    83 IPLLHLEFAIGQRLRKGSVGVWSTIHPTLKGVGIASMLVSFLVGLYYNTIIAWVMWYFFNSFQEP 147

  Fly   234 LPWADCPTRLYKNFTYDHEPECVASSPTQFYWYRTTLQCSESVDMPENFNYHMAIALIVSWFLVY 298
            |||:.||  |..|.| ::..||..||...::|||.||..|..:|...|..:.:.:.|..:|.::|
 Frog   148 LPWSVCP--LNANRT-EYVSECARSSSVDYFWYRETLNTSTKIDDSGNLQWWLVLCLACAWGVLY 209

  Fly   299 ICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGITLKGAADGVAHLFTPRWETLLDPVVWLEAGTQ 363
            :|.::||.::||.||:|:..||:||.||..||:||||:.:|:.:||||....|.:||.||:||.|
 Frog   210 VCTIRGIETTGKAVYVTSTLPYLVLTIFLIRGLTLKGSVNGIIYLFTPDISELANPVTWLDAGAQ 274

  Fly   364 IFFSLGLAFGGLIAFSSYNPANNNCYRDAILVSLTNCGTSMFAGVVVFSVIGFKATATFDRCTEE 428
            :|:|..|||||||:|||||..:|||.|||:::|:.|..||:::..|::|:|||:|||.:|.|.:.
 Frog   275 VFYSFSLAFGGLISFSSYNSVHNNCERDAVIISVINGFTSVYSATVIYSIIGFRATARYDDCVDS 339

  Fly   429 R-----------NGLVAQN-----------------KTHNLPVCDLQTELANSASGTGLAFIIFT 465
            .           .|.:.|:                 .|..|..|||...|::...|||||||:||
 Frog   340 NILSLTNAFDLPEGNITQDNYDSMLNHLNQSNSDLVSTLKLETCDLDQILSDGVEGTGLAFIVFT 404

  Fly   466 EAINQFPGAQLWAVLFFLMLFTLGIDSQFGTLEGVVTSLVDMKLFP-NLPKEYIVGALCFSCCTI 529
            |||.:.|.:.||:||||:|||.||:.|.||.:|||:..|:|:|:.| :.|||.:.|.:|.....|
 Frog   405 EAITKMPISPLWSVLFFIMLFCLGLSSMFGNMEGVLVPLLDLKIIPKSFPKEAVTGLICAVSFLI 469

  Fly   530 SMCFANGAGSYIFQLMDSFAGNFPLLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNFYWMFCW 594
            ::.|...:|:|...|.|.|||:.||||||..|..|:.||||:.||::||:.|.|.:||.:|...|
 Frog   470 ALIFVLESGNYWLALFDGFAGSIPLLIIAFCEMFSVVYIYGIDRFNEDIKFMIGHKPNIFWQATW 534

  Fly   595 KYLSPCAMVTILLASFYQLLTEGSSYPAWIGS-----KGATEGMEWPHWCIVVAFFLILSSI--L 652
            :.:||..|:.|.|..|...:|:...|..|...     |...|  .:|.|  |.|..:||:.:  |
 Frog   535 RVISPLLMLVIFLFYFVVKVTQKLEYITWDPDYEQFPKSKPE--SYPAW--VYAIIVILAGVPSL 595

  Fly   653 WIPIVAVLRLCGIKVVEDSD 672
            .||:.|:.:.......:|.|
 Frog   596 VIPVYAIYKFIRNCCTKDED 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 256/576 (44%)
slc6a19NP_001120585.1 SLC6sbd_B0AT1 32..612 CDD:212085 257/586 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 524 1.000 Domainoid score I302
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D251682at33208
OrthoFinder 1 1.000 - - FOG0001784
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4904
SonicParanoid 1 1.000 - - X2259
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.140

Return to query results.
Submit another query.