DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12206 and AT5G39865

DIOPT Version :10

Sequence 1:NP_570060.1 Gene:CG12206 / 31316 FlyBaseID:FBgn0029662 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_680368.1 Gene:AT5G39865 / 833983 AraportID:AT5G39865 Length:390 Species:Arabidopsis thaliana


Alignment Length:403 Identity:91/403 - (22%)
Similarity:157/403 - (38%) Gaps:125/403 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 CDESSNSSLSCDSLHSGGLLPTTLLRDIRFRERASGPLVTKINGRPLQFETDGYYTFHVREHENF 352
            |..|.|.: .|.:. .|||.|..:.|.......           .|.|...|.|:|..:..    
plant     3 CASSKNRN-RCRNC-KGGLSPVIVPRSYSMHVH-----------HPAQHTGDSYHTVALTS---- 50

  Fly   353 RSFGSNSSTEYEAQHF------------TDEQPGEDFV----GF---------RDIRT------- 385
            .:.||.|..:...:||            ..:|.||:.:    ||         .|::.       
plant    51 STIGSLSLCDSSLRHFHKHLEDSFYKQRVSDQMGEETLISGNGFLHGDEEKMNLDLQAKVIEAKV 115

  Fly   386 --------AGKLAGNSTIKSAKG---------TVRGVK--------NRVRNGVATFLQLQ----- 420
                    ..|:...:.|.:..|         .:.|::        |.:|:....|:::|     
plant   116 WSSTINEKIPKIVAKTPIVTPPGEPETINTWELMEGLEDVSPLRSPNHLRSFSFDFVRIQPSHDH 180

  Fly   421 ---------------QPNVKN---------------YMEKDVGK--VVLYTTSMGIIRDTYAKCA 453
                           ..|||:               :..|.:||  ||||.||:..||.||..|.
plant   181 DHDVAVSFDLPKSRFHENVKSSCRVDDLDPPDIVSRFKRKTLGKERVVLYFTSLRGIRKTYEDCC 245

  Fly   454 NVKKILRTLLIKFEERDIFMSVEYQQEMRERMQDE-----TIRVPQLFVEGQLIGDANIVERLNE 513
            |::.||::|.|:.:|||:.|...::.|:::.::.:     .|.:|::|:..:.:|....:::|||
plant   246 NIRIILKSLGIRIDERDVSMHSGFKDELKKLLEGKFNNGVGITLPRVFLGNKYLGGVEEIKKLNE 310

  Fly   514 SGELRQLLRPYKSI-----ATAYTCQTCGGYRMLPCPACNGSKKSMH----RNHFTAEFVALKCM 569
            :|||.:|::..:.:     .....|:.||..|.:||..|:||.|..|    .:....|:...:|.
plant   311 NGELEKLIKDCEMVEDGSPGFGNECEACGDVRFVPCETCSGSCKLYHEGEEEDEGVTEYGFQRCP 375

  Fly   570 NCDEVGLIKCPNC 582
            .|:|.|||:|..|
plant   376 YCNENGLIRCHVC 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12206NP_570060.1 GRX_GRX_like 434..579 CDD:239329 51/160 (32%)
AT5G39865NP_680368.1 GRX_GRX_like 226..385 CDD:239329 50/158 (32%)

Return to query results.
Submit another query.