DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12206 and AT3G57070

DIOPT Version :9

Sequence 1:NP_570060.1 Gene:CG12206 / 31316 FlyBaseID:FBgn0029662 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_567043.2 Gene:AT3G57070 / 824874 AraportID:AT3G57070 Length:417 Species:Arabidopsis thaliana


Alignment Length:503 Identity:115/503 - (22%)
Similarity:200/503 - (39%) Gaps:123/503 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 GEIAGATASAEAAASAATAAAATATSPTIISCNGEIAASQAAATAADTAATLQHNNTVKIQIESQ 178
            |..|..|||   :.|:|::::|.:..||..|.:   ::|.|...|......|.|:...:     :
plant     2 GSSASKTAS---SVSSASSSSAFSPPPTKFSSD---SSSPAVQRAFSFPTPLVHHPPAR-----K 55

  Fly   179 GQQRTLGKQISVVKLNEGVEEMQQHMCYLVDTSGQYSPCETLDSGTGSDLENHPQ----QQQQPQ 239
            |....|   :|:...:.|       ...|:|..|        ...:.||.:..|:    .:..|.
plant    56 GDSHHL---VSLTSTSYG-------SLLLLDLDG--------SKNSSSDQQTLPRISISGKNTPD 102

  Fly   240 QVRSPQLELHLQTTRLM--VNEEADHKHSPLETPSPVPKRAYSLTDDSEECDESSNSSLSCDSLH 302
            .| ||  :..:.|..||  :::|.:     .|.|.| .||..|  |...:.|.:.|.||      
plant   103 PV-SP--DSVINTWELMDGLDDEFE-----FEIPKP-GKRLNS--DFCSKPDPNRNVSL------ 150

  Fly   303 SGGLLPTTLLRDIRFRERASGPLVTKINGRPLQFETDGYYTFHVREHENFRSFGSNSSTEYEAQH 367
                                       ||..|:.: :.|....:.|.:.          ::....
plant   151 ---------------------------NGSSLKLD-ESYEIVRIEEDDG----------DWVPLT 177

  Fly   368 FTDEQP------GEDFVGFRD--IRTAGKLAGNSTIKSAKGTVRGVKNRVRN------------- 411
            :..:||      .|.|:...|  |.::.|.|.:|.:.|.....|......::             
plant   178 YKPKQPLWKHLSEESFLSDLDPSIVSSYKKALSSKLLSNHSNTRNPHRPTKSLSCSPSSNPSILI 242

  Fly   412 -----GVATFLQLQQPNVKNYMEKDVGKVVLYTTSMGIIRDTYAKCANVKKILRTLLIKFEERDI 471
                 .|::...:..| .|..:.....|:|||.|::..||.||..|..|:.|||.:.:..:||||
plant   243 SEEPKSVSSSQLISSP-AKPRLPGTEDKIVLYFTTLRGIRKTYEDCCCVRAILRGVQVSVDERDI 306

  Fly   472 FMSVEYQQEMRERM--QDETIRVPQLFVEGQLIGDANIVERLNESGELRQLLRPYKSIATAYTCQ 534
            .|..:|::|::..:  .::.:.:||:|:.|..||....:.:||:.|||.::|:.:.:.....||:
plant   307 SMDSKYRKELQSVLGAAEKPVCLPQVFIRGTHIGGVEEIMQLNDGGELAEMLKDFPACERLGTCR 371

  Fly   535 TCGGYRMLPCPACNGSKKSMHRNHFTAEFVALKCMNCDEVGLIKCPNC 582
            :||..|.:||..|:||.|.........:    :|..|:|.||::|..|
plant   372 SCGDARFVPCTNCDGSTKVFEEQDERFK----RCPKCNENGLVRCRVC 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12206NP_570060.1 GRX_GRX_like 434..579 CDD:239329 49/146 (34%)
AT3G57070NP_567043.2 GRX_GRX_like 269..412 CDD:239329 49/146 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 64 1.000 Domainoid score I3655
eggNOG 1 0.900 - - E1_KOG2824
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm977
orthoMCL 1 0.900 - - OOG6_104403
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1599
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.670

Return to query results.
Submit another query.