DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12206 and Grx1

DIOPT Version :9

Sequence 1:NP_570060.1 Gene:CG12206 / 31316 FlyBaseID:FBgn0029662 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001246827.1 Gene:Grx1 / 40053 FlyBaseID:FBgn0036820 Length:114 Species:Drosophila melanogaster


Alignment Length:126 Identity:27/126 - (21%)
Similarity:56/126 - (44%) Gaps:29/126 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 VKNRVRNGVATFLQLQQPNVKNYMEKDVGKVVLYTTSMGIIRDTYAK-CANVKKILRTLLIKFEE 468
            |.:.:|:.:......|...|:|.:..:  |||:::       .||.. |...|:       .|::
  Fly     4 VGSALRSPIVDMSTKQAKFVENTIASN--KVVIFS-------KTYCPYCTMAKE-------PFKK 52

  Fly   469 RDIFMSV----------EYQQEMRERMQDETIRVPQLFVEGQLIGDANIVERLNESGELRQ 519
            .::..::          |.|..:.|.....|  ||::|::|:.||....::|:.|:|.|::
  Fly    53 LNVDATIIELDGNPDGNEIQAVLGEITGART--VPRVFIDGKFIGGGTDIKRMFETGALQK 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12206NP_570060.1 GRX_GRX_like 434..579 CDD:239329 22/97 (23%)
Grx1NP_001246827.1 GRX_GRXh_1_2_like 31..111 CDD:239511 22/95 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457828
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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