DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myc and mych

DIOPT Version :9

Sequence 1:NP_001259204.1 Gene:Myc / 31310 FlyBaseID:FBgn0262656 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001119581.1 Gene:mych / 560341 ZFINID:ZDB-GENE-030219-51 Length:360 Species:Danio rerio


Alignment Length:243 Identity:67/243 - (27%)
Similarity:106/243 - (43%) Gaps:43/243 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   464 ASSSPVKSVANSRYPSPSSTPYQNCSS---ASPSYSPLSVDSSNVSSSSSSSSSQSSFTTSSSNK 525
            :..||:    :|:....|::.|.:.|:   :|.|.|...:|...|..||:.:.||.......|.:
Zfish   147 SEDSPL----DSQEQIESTSDYGSLSTGGESSTSDSEEEIDVVTVRRSSTLTRSQHQQQLEDSRR 207

  Fly   526 GRKRSSLKDPGLLISSSSVY-LPGVNNKVTHSSMMSKKSRGKKVVGTSSGNTSPISSGQDVDAMD 589
            .::| :||.....|.....| .|...:.....|...|::||       ||::             
Zfish   208 EQQR-ALKRYHFEIQQQHNYAAPRPASPPPPPSPPLKRTRG-------SGDS------------- 251

  Fly   590 RNWQRRSGGIATSTSSNSSVHRKDFVLGFDEADTIEKRNQHNDMERQRRIGLKNLFEALKKQIPT 654
               ||   |:.....|.|.|.|:.    .|..|..|:|..||.||||||..|||.|..|:..:|.
Zfish   252 ---QR---GLQIPGRSRSLVVRQP----VDTEDEEERRRTHNVMERQRRNELKNCFLRLRDNVPE 306

  Fly   655 IRDKERAPKVNILREAAKLCIQLTQEEKELSMQRQLLSLQLKQRQDTL 702
            :.:.::|.||.||:.|.:....|..|.:.|:.:|.    :|::||:.|
Zfish   307 LSNNDKASKVVILKRAKESIRNLESENQRLTSKRD----KLRERQEQL 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MycNP_001259204.1 HLH 625..682 CDD:238036 24/56 (43%)
mychNP_001119581.1 Myc_N 30..226 CDD:279405 20/83 (24%)
HLH 275..334 CDD:238036 24/58 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2483
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45851
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.