DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myc and mycla

DIOPT Version :9

Sequence 1:NP_001259204.1 Gene:Myc / 31310 FlyBaseID:FBgn0262656 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_998102.1 Gene:mycla / 405873 ZFINID:ZDB-GENE-040426-2439 Length:372 Species:Danio rerio


Alignment Length:308 Identity:68/308 - (22%)
Similarity:116/308 - (37%) Gaps:95/308 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   443 ISIDHMKQKPRYNNFNLPYTPASSSPVKSVANSRYPSPSSTPYQNCSSASPSYSP-----LSVDS 502
            :|..|..:|..:..    ..|.::....|.|.....:.|.||... |.|:...||     |.|..
Zfish   111 LSTSHRLEKVAHGE----RAPVAALIQNSTAQKAARAASGTPVTG-SQAAQCVSPAAVLELPVPH 170

  Fly   503 SNVSSSSSSSSSQSS-------------FTTSSSNKGRKRSSLKDPGLLISSSSVYLPGVNNKVT 554
            ..|::.||.|..:|.             .|..:..|..:..|.:.|..:..|:..:  |...|..
Zfish   171 KKVAAGSSGSECRSDSSDDDEDDDEIDVVTVDNRPKRGRPPSRRTPVTITVSADPF--GPCPKRF 233

  Fly   555 HSSM------------------------MSKKSRGKKVVGTSSGNTSPISSGQDVDAMDRNWQRR 595
            |.|:                        :||:.|    :.:||..:||:||.             
Zfish   234 HVSLHRQQHNYAAPSPDTDPEDDFEIEPVSKRPR----LESSSAPSSPLSSP------------- 281

  Fly   596 SGGIATSTSSNSSVHRKDFVLGFDEADTIEKRNQHNDMERQRRIGLKNLFEALKKQIPTIRDKER 660
                |||.|.:|:..|::|                  :||:||..|::.|:||:::||.:....:
Zfish   282 ----ATSDSEDSTEQRRNF------------------LERKRRDDLRSRFQALREEIPGLSGSSK 324

  Fly   661 APKVNILREAAKLCIQL-------TQEEKELSMQRQLLSLQLKQRQDT 701
            ..||.||.:|....:||       .||:::|..::|.|..::...|::
Zfish   325 TSKVAILTQATDYLLQLHSSQRRQAQEKRKLKAKQQQLLRRISALQNS 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MycNP_001259204.1 HLH 625..682 CDD:238036 19/63 (30%)
myclaNP_998102.1 Myc_N 17..269 CDD:279405 32/168 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 172..226 10/53 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 243..306 20/101 (20%)
HLH 292..346 CDD:238036 19/71 (27%)
Leucine-zipper 341..369 6/27 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45851
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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