DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myc and Myc

DIOPT Version :9

Sequence 1:NP_001259204.1 Gene:Myc / 31310 FlyBaseID:FBgn0262656 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_036735.2 Gene:Myc / 24577 RGDID:3130 Length:453 Species:Rattus norvegicus


Alignment Length:468 Identity:119/468 - (25%)
Similarity:174/468 - (37%) Gaps:130/468 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 QQQLNQQQLDEQQQAIDIATGRNTVDSPP------------------TTGSDSDSDDGEPLNFDL 344
            |||  |.:|.....:.||......:.:||                  |:.|..:.|||...||  
  Rat    48 QQQ--QSELQPPAPSEDIWKKFELLPTPPLSPSRRSGLCSPSYVAVATSFSPREDDDGGGGNF-- 108

  Fly   345 RHHRTSKSGSNASITTNNNNSNNKNNKLKNNSNGMLHMMHITDHSYTRCNDMVDDGPNLETPSDS 409
                                          ::...|.||     :.....|||    |.....|.
  Rat   109 ------------------------------STADQLEMM-----TELLGGDMV----NQSFICDP 134

  Fly   410 DEEIDVVSYTDKKLPTNPSCHLMGALQFQMAHKISIDHMK--QKPRYNNFNLPYTPASSSPVKS- 471
            |:|..:.:...:      .|...|   |..|.|:..:.:.  |..|.::.:|  :||....|.| 
  Rat   135 DDETFIKNIIIQ------DCMWSG---FSAAAKLVSEKLASYQAARKDSTSL--SPARGHSVCST 188

  Fly   472 ---------VANSRYPSPSST-PYQNCSSASPSYSPLSVDSSNVSSSSSS-SSSQSS-------- 517
                     .|.|....||.. ||....|:||. |..|.||:..||||.| .||:||        
  Rat   189 SSLYLQDLTAAASECIDPSVVFPYPLNDSSSPK-SCTSSDSTAFSSSSDSLLSSESSPRATPEPL 252

  Fly   518 -------FTTSSSNKGRKRS---------SLKDPGLLISSSSVYLPGVNNKVTHSSMMSKKSRGK 566
                   .||||.::..:..         ..:.|....|.|.......::|..||.::.|:..  
  Rat   253 VLHEETPPTTSSDSEEEQDDEEEIDVVSVEKRQPPAKRSESGSSPSRGHSKPPHSPLVLKRCH-- 315

  Fly   567 KVVGTSSGN-TSPISSGQDVDAMDRNWQRRSGGIATSTSSN---SSVHRKDFVLGFDEADTIEKR 627
              |.|...| .:|.|:.:|..|..|. :..||.:....|:|   ||....|       .:..:||
  Rat   316 --VSTHQHNYAAPPSTRKDYPAAKRA-KLDSGRVLKQISNNRKCSSPRSSD-------TEENDKR 370

  Fly   628 NQHNDMERQRRIGLKNLFEALKKQIPTIRDKERAPKVNILREAAKLCIQLTQEEKELSMQRQLLS 692
            ..||.:|||||..||..|.||:.|||.:.:.|:||||.||::|....:.:..:|.:|..::.||.
  Rat   371 RTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQADEHKLISEKDLLR 435

  Fly   693 L---QLKQRQDTL 702
            .   |||.:.:.|
  Rat   436 KRREQLKHKLEQL 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MycNP_001259204.1 HLH 625..682 CDD:238036 25/56 (45%)
MycNP_036735.2 Myc_N 20..359 CDD:279405 84/370 (23%)
HLH 366..425 CDD:238036 25/58 (43%)
Myc-LZ 422..451 CDD:280500 7/31 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11367
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto97670
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45851
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.010

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