DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnc and Pde7a

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:NP_112342.1 Gene:Pde7a / 81744 RGDID:68391 Length:482 Species:Rattus norvegicus


Alignment Length:478 Identity:133/478 - (27%)
Similarity:216/478 - (45%) Gaps:71/478 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   626 VPASNKSRRP--NQSSSASRSGNPPGAPLSQGEEAYTRLATDTIEELDWCLDQLETIQTHRSVSD 688
            ||....|||.  :.|||::..|.|....|||...|   ::.|:                    ||
  Rat    16 VPQHVLSRRGAISFSSSSALFGCPHPRQLSQRRGA---ISYDS--------------------SD 57

  Fly   689 MASLKFKRMLN----KELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSLRVEDNPELVAANAA 749
            ..:| :.|||.    :..:.| |:.|.|:.  .||.......|.|.:..          |:|...
  Rat    58 QTAL-YIRMLGDVRVRSRAGF-ETERRGSH--PYIDFRIFHAQSEIEAS----------VSARNI 108

  Fly   750 AGQQSAGQYAR-SRSPRGPPMSQISGVKRPLSHTNSFTGERLPTFGVETPRENELGTLLGELDTW 813
            ....|..:|.| ||..||..:.:...:                   ::.....:...:|.::..|
  Rat   109 RRLLSFQRYLRSSRFFRGATVCRSLNI-------------------LDEDYNGQAKCMLEKVGNW 154

  Fly   814 GIQIFSIGEFSVNRPLTCVAYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLHAAD 878
            ...||.....:....|..:.:.:|....|:....:.......|:..:::.|...||:||::||||
  Rat   155 NFDIFLFDRLTNGNSLVSLTFHLFSLHGLIEYFHLDMVKLRRFLVMIQEDYHSQNPYHNAVHAAD 219

  Fly   879 VTQSTNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENH 943
            |||:.:..|..|.|....||.::..:|.||..||:||||:...||:.::..||.:|.:.||||||
  Rat   220 VTQAMHCYLKEPKLANSVTPWDILLSLIAAATHDLDHPGVNQPFLIKTNHYLATLYKNTSVLENH 284

  Fly   944 HLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGV 1008
            |...|..||:..|  :|.::..:.|..:...:..::|:||:|:....|:..::.::      .|.
  Rat   285 HWRSAVGLLRESG--LFSHLPLESRHEMEAQIGALILATDISRQNEYLSLFRSHLD------KGD 341

  Fly  1009 LLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHN 1073
            |.||:...|..||:..:.|||:.||.:...|.|:|...:.||||.|||.|::..:.:||:|||..
  Rat   342 LHLDDGRHRHLVLQMALKCADICNPCRNWELSKQWSEKVTEEFFHQGDIEKKYHLGVSPLCDRQT 406

  Fly  1074 ATIEKSQVGFIDYIVHPLWETWA 1096
            .:|...|:||:.|:|.||:..||
  Rat   407 ESIANIQIGFMTYLVEPLFTEWA 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 84/227 (37%)
Pde7aNP_112342.1 PDEase_I 211..431 CDD:395177 84/227 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.