DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnc and pde4cb

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_021335380.1 Gene:pde4cb / 571344 ZFINID:ZDB-GENE-030131-4075 Length:721 Species:Danio rerio


Alignment Length:706 Identity:404/706 - (57%)
Similarity:488/706 - (69%) Gaps:83/706 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   506 QKYHS---RYLKNRRHTLAN----------------VRFDVENGQG-ARSPLEGGSPSAGLVLQN 550
            |:|||   |||...:.|..|                .|||||||.. .||.|: .|||:|||||.
Zfish    32 QRYHSDTERYLCCNKATEKNRPGLKKPRMSWPSSFHKRFDVENGLSMGRSSLD-PSPSSGLVLQA 95

  Fly   551 LPQRRESFLYRSDSDFEMSPKSMSRNSSIASERFKEQEASILVDRSHGEDLIVTPFAQILASLRS 615
            ..||||||||||||||::|||:||||||.|||             .||||:|||||||:|||||:
Zfish    96 NSQRRESFLYRSDSDFDLSPKTMSRNSSTASE-------------LHGEDMIVTPFAQVLASLRT 147

  Fly   616 VRNNLLSLTNV-PASNKSRRPNQSSSASRSGNPPGA-PLSQGEEAYTRLATDTIEELDWCLDQLE 678
            ||.|:.:||:: ..|||  ||:.:       ||..| ..:..:|||.:|..:|:|||||||||||
Zfish   148 VRGNVAALTHMQDRSNK--RPSGT-------NPQSACKTNLSDEAYQKLTVETLEELDWCLDQLE 203

  Fly   679 TIQTHRSVSDMASLKFKRMLNKELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSLRVEDNPEL 743
            |:||..|||:|||.|||||||:||:..||:||||||:||:|.||.|.||.:.:|.|         
Zfish   204 TLQTRHSVSEMASNKFKRMLNRELTQLSETSRSGNQVSEFIASTILQKQYDVELLS--------- 259

  Fly   744 VAANAAAGQQSAGQYARSRSPRGPPMSQISGVKRPLSHTNSFTGERLPTFGVETPRENELGTLLG 808
                ||..::.          :..|||||||| |.||.:.|.....:|.|||.|..|:.|...|.
Zfish   260 ----AACKEEK----------KRRPMSQISGV-RKLSPSPSLPPTCIPRFGVNTQHESLLAKELE 309

  Fly   809 ELDTWGIQIFSIGEFSVNRPLTCVAYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNS 873
            :||.|||.||.|.|:|.|||||.:.|||||.|:||.:..||..|||.|:.||||||..|..:||:
Zfish   310 DLDRWGIDIFKIAEYSGNRPLTVMMYTIFQERDLLKTFKIPSDTFLTFLMTLEDHYHADVAYHNN 374

  Fly   874 LHAADVTQSTNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDES 938
            :|||||.|||:|||:|||||.|||.||:..||||:.||||||||:|||||:|::|||||||||.|
Zfish   375 IHAADVVQSTHVLLSTPALEDVFTDLEIMAALFASAIHDVDHPGVTNQFLINTNSELALMYNDAS 439

  Fly   939 VLENHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKV 1003
            |||||||||.|||||.:.||||||:.|||||:||:|.||:||:|||||||:.|||||||||||||
Zfish   440 VLENHHLAVGFKLLQEENCDIFCNLSKKQRQSLRQMTIDMVLATDMSKHMNFLADLKTMVETKKV 504

  Fly  1004 AGSGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPM 1068
            ...||||||||:||||||:|:|||||||||||||.||::|...:|.|||.|||:||:.|:|:|||
Zfish   505 TSQGVLLLDNYSDRIQVLQNMVHCADLSNPTKPLELYRKWTDRIMVEFFSQGDRERDKGIDVSPM 569

  Fly  1069 CDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIP--PSPPPSGVD 1131
            ||:|.|::|.:||||||||:|||||||||||||||||||||||:||::||||||  |||.|...|
Zfish   570 CDKHTASMENTQVGFIDYIIHPLWETWADLVHPDAQDILDTLEDNREWYQSMIPRSPSPTPEEQD 634

  Fly  1132 ENP------QEDRIRFQVTLEESDQENLAELEEGDESGGESTT------TGTTGTT 1175
            ..|      ..::.:|::||||.|.|...|.|..|.....:.|      |...|.|
Zfish   635 SRPTGVTGSAGEKFQFELTLEEEDGELETEEEHTDIERSRTMTDPEHPQTSPLGIT 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 182/240 (76%)
pde4cbXP_021335380.1 PDEase_I 371..608 CDD:306695 178/236 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 411 1.000 Domainoid score I651
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 757 1.000 Inparanoid score I535
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 1 1.000 - - FOG0000302
OrthoInspector 1 1.000 - - otm25732
orthoMCL 1 0.900 - - OOG6_100782
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X171
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.730

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