DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnc and pde4d

DIOPT Version :10

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_068079221.1 Gene:pde4d / 566998 ZFINID:ZDB-GENE-081105-16 Length:806 Species:Danio rerio


Alignment Length:799 Identity:420/799 - (52%)
Similarity:527/799 - (65%) Gaps:128/799 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   451 GGTATTTQNSSSVS--VAAHHRLTSSSASALATSHPSNSQLLPTSKMQAEQGSIGDLQKYHSRYL 513
            |...||..:..:|:  .|..|.....:..:|...:...|:    ...:..|....|.:||.:...
Zfish     4 GNEVTTLVSPGNVTDGNAPKHLWRQQNPVSLQIQNSLGSR----KNYRVRQRGFSDTEKYLNPRT 64

  Fly   514 KNRRHTLAN--------------------VRFDVENG-QGARSPLEG-GSPSAGLVLQ-NL--PQ 553
            .:|.:.:..                    .||||:|| ...||||:. .||.:||:|| |.  .|
Zfish    65 MDRTYAVDTGTRPGLKKSRMSWPSSFQGLKRFDVDNGTSSGRSPLDPMASPGSGLILQANFVHSQ 129

  Fly   554 RRESFLYRSDSDFEMSPKSMSRNSSIASERFKEQEASILVDRSHGEDLIVTPFAQILASLRSVRN 618
            ||||||||||||:::|||||||||||||:             .||:|:|||||||:|||||:|||
Zfish   130 RRESFLYRSDSDYDLSPKSMSRNSSIASD-------------IHGDDMIVTPFAQVLASLRTVRN 181

  Fly   619 NLLSLTNV--PASNKSRRPNQSSSASRSGNPPGAPLSQ--------------------------- 654
            |..:||||  ..||..|.|        ..|||  |:::                           
Zfish   182 NFAALTNVQQERSNNKRSP--------MCNPP--PITKTSYTVLEVQTLKSKSTDAQLHKTQTKQ 236

  Fly   655 ----GEEAYTRLATDTIEELDWCLDQLETIQTHRSVSDMASLKFKRMLNKELSHFSESSRSGNQI 715
                .||||.:|||:|:||||||||||||:||..|||:|||.|||||||:||:|.||.||||||:
Zfish   237 ANGDSEEAYQKLATETLEELDWCLDQLETLQTRHSVSEMASNKFKRMLNRELTHLSEMSRSGNQV 301

  Fly   716 SEYICSTFLDKQQEFDLPSLRVEDNPELVAANAAAGQQSAGQYARSRSPRGPPMSQISGVKRPLS 780
            ||||.|||||||.|.::||                     .|..:.:..:..|||||||||: |:
Zfish   302 SEYISSTFLDKQNEVEMPS---------------------PQSQKDKEKKKRPMSQISGVKK-LT 344

  Fly   781 HTNSFTGERLPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTCVAYTIFQSRELLTS 845
            |::|.|...:|.|||:|..|:||...|.:::.||:.:|.:.|||.|||||.:.|||||.|:||.:
Zfish   345 HSSSLTNSNIPRFGVKTETEDELAKELEDVNKWGLNVFKVSEFSGNRPLTVMMYTIFQERDLLKT 409

  Fly   846 LMIPPKTFLNFMSTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGALFAACI 910
            ..||..||:.::.||||||..|..:||::|||||||||:|||:|||||.|||.||:..|:||:.|
Zfish   410 FKIPLDTFITYLMTLEDHYHADVAYHNNIHAADVTQSTHVLLSTPALEAVFTDLEILAAIFASAI 474

  Fly   911 HDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMV 975
            |||||||::||||:|::|||||||||.||||||||||.|||||.:.||||.|:.|||||:|||||
Zfish   475 HDVDHPGVSNQFLINTNSELALMYNDSSVLENHHLAVGFKLLQEENCDIFQNLTKKQRQSLRKMV 539

  Fly   976 IDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLY 1040
            |||||:|||||||:||||||||||||||..|||||||||:||||||:|:|||||||||||||.||
Zfish   540 IDIVLATDMSKHMNLLADLKTMVETKKVTSSGVLLLDNYSDRIQVLQNMVHCADLSNPTKPLQLY 604

  Fly  1041 KRWVALLMEEFFLQGDKERESGMDISPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQD 1105
            ::|...:|||||.|||:|||.||:||||||:|||::|||||||||||||||||||||||||||||
Zfish   605 RQWTDRIMEEFFSQGDRERERGMEISPMCDKHNASVEKSQVGFIDYIVHPLWETWADLVHPDAQD 669

  Fly  1106 ILDTLEENRDYYQSMIPPSPPPSGVDENPQ------EDRIRFQVTLE---ESD---------QEN 1152
            ||||||:||::|||.||.||.|: :|.:.:      :::.:|::|||   |||         :|:
Zfish   670 ILDTLEDNREWYQSTIPQSPSPA-LDTSSEGRRAAGQEKFQFELTLEEDGESDTEKDSGSPPEED 733

  Fly  1153 LAELEEGDESGGESTTTGT 1171
            ..|.||.:.|..:|.|..|
Zfish   734 EEEEEEEENSCSDSKTLCT 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDE4_UCR 603..725 CDD:465648 80/154 (52%)
PDEase_I 870..1110 CDD:459723 191/239 (80%)
pde4dXP_068079221.1 PDE4_UCR 166..311 CDD:465648 80/154 (52%)
PDEase_I 434..674 CDD:459723 191/239 (80%)

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