DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnc and pde4ba

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_021332832.1 Gene:pde4ba / 565706 ZFINID:ZDB-GENE-030131-9570 Length:734 Species:Danio rerio


Alignment Length:767 Identity:426/767 - (55%)
Similarity:519/767 - (67%) Gaps:104/767 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 SNSNETLASSSTTGGTATTTQNSSSVSVAAHHRLTSSSASALATSHPSNSQLLPTSKMQAEQGSI 502
            |..:|:..||..|.|          |.:....|..|           .|.||.|.|..|.|:...
Zfish    22 SRLSESFTSSGCTLG----------VDLRRRRRRFS-----------GNLQLPPLSWRQMERSRS 65

  Fly   503 GDLQKYHSR-----YLKNRRHTLANVR---FDVENGQGAR-SPLE-GGSPSAGLVLQ-NLP---Q 553
            .| .::.:|     ::...|..:..|.   ||||||..|. |||: ..||.:||||. |.|   |
Zfish    66 PD-DEFMARPTTLPFITPPRIDITPVDTECFDVENGPSASCSPLDPQASPGSGLVLHTNFPGHNQ 129

  Fly   554 RRESFLYRSDSDFEMSPKSMSRNSSIASERFKEQEASILVDRSHGEDLIVTPFAQILASLRSVRN 618
            ||||||||||||:::||||||||||:|||             .||:|||||||||:|||||||||
Zfish   130 RRESFLYRSDSDYDLSPKSMSRNSSVASE-------------LHGDDLIVTPFAQVLASLRSVRN 181

  Fly   619 NLLSLTNVPASNKSRRP-NQSSSASRSGNPPGAPLSQGEEAYTRLATDTIEELDWCLDQLETIQT 682
            |...||||..::..|.| :...|.:|...|        :|:|.:||.:|:|||||||||||||||
Zfish   182 NFTVLTNVQCTSNKRSPVSNQPSITRVCLP--------DESYQKLAVETMEELDWCLDQLETIQT 238

  Fly   683 HRSVSDMASLKFKRMLNKELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSLRVEDNPELVAAN 747
            :||||||||.|||||||:||:|.||.||||||:||:|.:||||||.:.::||    ..|:     
Zfish   239 YRSVSDMASNKFKRMLNRELTHLSEMSRSGNQVSEFISNTFLDKQNDVEIPS----PTPK----- 294

  Fly   748 AAAGQQSAGQYARSRSPRGPPMSQISGVKRPLSHTNSFT-GERLPTFGVETPRENELGTLLGELD 811
                       ||.:..:...|:||||||: :||..|.. |  :..|||:|.:|:.|...|.:|:
Zfish   295 -----------AREKKKKQQLMTQISGVKK-VSHGPSLNCG--IARFGVKTDKEDLLSKELEDLN 345

  Fly   812 TWGIQIFSIGEFSVNRPLTCVAYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLHA 876
            .||:.||::.|:|.||||||:.|.|||.|:||.:..||..||:.:|.||||||.:|..:||||||
Zfish   346 RWGLNIFTVSEYSNNRPLTCIMYAIFQERDLLKTFKIPTDTFVTYMMTLEDHYHQDVAYHNSLHA 410

  Fly   877 ADVTQSTNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLE 941
            |||.|||::||:||||:.|||.||:..|:|||.||||||||::||||:|::||||||||||||||
Zfish   411 ADVAQSTHILLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLE 475

  Fly   942 NHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGS 1006
            ||||||.|||||...||||.|:.||||.:||:||||:||:||||||||||||||||||||||..|
Zfish   476 NHHLAVGFKLLQEDNCDIFQNLTKKQRTSLRRMVIDMVLATDMSKHMSLLADLKTMVETKKVTSS 540

  Fly  1007 GVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDR 1071
            |||||||||||||||.|:|||||||||||.|.||::|...:|||||.|||:|||.||:||||||:
Zfish   541 GVLLLDNYTDRIQVLRNMVHCADLSNPTKSLELYRQWTDRIMEEFFHQGDRERERGMEISPMCDK 605

  Fly  1072 HNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIPPSPPP--------- 1127
            |.|::|||||||||||||||||||||||||||||||||||:||::||||||.||.|         
Zfish   606 HTASVEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEDNRNWYQSMIPQSPSPPFYQPDKEG 670

  Fly  1128 SGVDENPQEDRIRFQVTLEESDQENLA--------ELEEGDESGG---ESTT 1168
            :|....|  |:.:|::||||.|.|...        |.||.:|..|   ||||
Zfish   671 NGGSSGP--DKFQFELTLEEEDSEGTEKDEQSQGDEEEEAEEDRGEEMESTT 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 190/240 (79%)
pde4baXP_021332832.1 PDEase_I 404..641 CDD:306695 186/236 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580637
Domainoid 1 1.000 411 1.000 Domainoid score I651
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 757 1.000 Inparanoid score I535
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 1 1.000 - - FOG0000302
OrthoInspector 1 1.000 - - otm25732
orthoMCL 1 0.900 - - OOG6_100782
Panther 1 1.100 - - LDO PTHR11347
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4715
SonicParanoid 1 1.000 - - X171
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.930

Return to query results.
Submit another query.