DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnc and pde4ba

DIOPT Version :10

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_073810362.1 Gene:pde4ba / 565706 ZFINID:ZDB-GENE-030131-9570 Length:806 Species:Danio rerio


Alignment Length:777 Identity:426/777 - (54%)
Similarity:517/777 - (66%) Gaps:119/777 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   465 VAAHHRLTS----SSASALATSHPSNSQLLPTSKMQAEQGSIG-----DLQKYHSRYLKN----- 515
            |....|.||    .|.|.|..|...:|:..|.|::.....|.|     ||::...|:..|     
Zfish    62 VQDRERKTSQKMRKSRSVLTVSPNEDSKEPPDSRLSESFTSSGCTLGVDLRRRRRRFSGNLQLPP 126

  Fly   516 ------------------RRHTLANVR-------------FDVENGQGAR-SPLE-GGSPSAGLV 547
                              |..||..:.             ||||||..|. |||: ..||.:|||
Zfish   127 LSWRQMERSRSPDDEFMARPTTLPFITPPRIDITPVDTECFDVENGPSASCSPLDPQASPGSGLV 191

  Fly   548 LQ-NLP---QRRESFLYRSDSDFEMSPKSMSRNSSIASERFKEQEASILVDRSHGEDLIVTPFAQ 608
            |. |.|   |||||||||||||:::||||||||||:|||             .||:|||||||||
Zfish   192 LHTNFPGHNQRRESFLYRSDSDYDLSPKSMSRNSSVASE-------------LHGDDLIVTPFAQ 243

  Fly   609 ILASLRSVRNNLLSLTNVPASNKSRRP-NQSSSASRSGNPPGAPLSQGEEAYTRLATDTIEELDW 672
            :||||||||||...||||..::..|.| :...|.:|...|        :|:|.:||.:|:|||||
Zfish   244 VLASLRSVRNNFTVLTNVQCTSNKRSPVSNQPSITRVCLP--------DESYQKLAVETMEELDW 300

  Fly   673 CLDQLETIQTHRSVSDMASLKFKRMLNKELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSLRV 737
            ||||||||||:||||||||.|||||||:||:|.||.||||||:||:|.:||||||.:.::||   
Zfish   301 CLDQLETIQTYRSVSDMASNKFKRMLNRELTHLSEMSRSGNQVSEFISNTFLDKQNDVEIPS--- 362

  Fly   738 EDNPELVAANAAAGQQSAGQYARSRSPRGPPMSQISGVKRPLSHTNSFT-GERLPTFGVETPREN 801
             ..|:                ||.:..:...|:||||||: :||..|.. |  :..|||:|.:|:
Zfish   363 -PTPK----------------AREKKKKQQLMTQISGVKK-VSHGPSLNCG--IARFGVKTDKED 407

  Fly   802 ELGTLLGELDTWGIQIFSIGEFSVNRPLTCVAYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVK 866
            .|...|.:|:.||:.||::.|:|.||||||:.|.|||.|:||.:..||..||:.:|.||||||.:
Zfish   408 LLSKELEDLNRWGLNIFTVSEYSNNRPLTCIMYAIFQERDLLKTFKIPTDTFVTYMMTLEDHYHQ 472

  Fly   867 DNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELA 931
            |..:|||||||||.|||::||:||||:.|||.||:..|:|||.||||||||::||||:|::||||
Zfish   473 DVAYHNSLHAADVAQSTHILLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELA 537

  Fly   932 LMYNDESVLENHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKT 996
            ||||||||||||||||.|||||...||||.|:.||||.:||:||||:||:|||||||||||||||
Zfish   538 LMYNDESVLENHHLAVGFKLLQEDNCDIFQNLTKKQRTSLRRMVIDMVLATDMSKHMSLLADLKT 602

  Fly   997 MVETKKVAGSGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERES 1061
            |||||||..||||||||||||||||.|:|||||||||||.|.||::|...:|||||.|||:|||.
Zfish   603 MVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKSLELYRQWTDRIMEEFFHQGDRERER 667

  Fly  1062 GMDISPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIPPSPP 1126
            ||:||||||:|.|::|||||||||||||||||||||||||||||||||||:||::||||||.||.
Zfish   668 GMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEDNRNWYQSMIPQSPS 732

  Fly  1127 P---------SGVDENPQEDRIRFQVTLEESDQENLA--------ELEEGDESGG---ESTT 1168
            |         :|....|  |:.:|::||||.|.|...        |.||.:|..|   ||||
Zfish   733 PPFYQPDKEGNGGSSGP--DKFQFELTLEEEDSEGTEKDEQSQGDEEEEAEEDRGEEMESTT 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDE4_UCR 603..725 CDD:465648 76/122 (62%)
PDEase_I 870..1110 CDD:459723 189/239 (79%)
pde4baXP_073810362.1 None

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