DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnc and pde11a

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_689838.4 Gene:pde11a / 561338 ZFINID:ZDB-GENE-070912-207 Length:894 Species:Danio rerio


Alignment Length:888 Identity:192/888 - (21%)
Similarity:318/888 - (35%) Gaps:281/888 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   482 SHPSNSQLLPTSKMQAEQGSIGD-LQKYHSRYLKNRRHTL-------ANVRFDVENGQGARSPL- 537
            |||...:...::..:....|.|| ||:..|:  |..|.|.       ||..:|......|:.|| 
Zfish    41 SHPKTPEKAASACAKDSWASRGDGLQRRASQ--KELRKTFARSKAINANRTYDEHVNSRAQEPLT 103

  Fly   538 ---------EGGS--PSAGLVLQ-------NLPQ----------------RRESFLYRSDSDFEM 568
                     :..|  |:...:|.       |:||                .||.||       |:
Zfish   104 SMRRRALLRKASSLPPTTAHILSALLESRVNIPQYPSTAVDYKYYLKEHNEREFFL-------EL 161

  Fly   569 SPKSMSRNSSIASERFK-----------EQEASILVDRSHGEDLIVTPFAQILAS---LRSVRNN 619
             .|.:|.:..:.|..:|           ::.:..||:....:..:|:.|..:.|.   |.|:.|:
Zfish   162 -VKDISNDLDLTSLSYKILVFVCIMVDADRCSLFLVEGPTNKKTLVSKFFDVHAGTTVLPSLSNS 225

  Fly   620 ----------LL-------SLTNVPASNKSRR-------------------PNQSSSASRSG--- 645
                      ::       ...|:|.:.:..|                   |..:|.....|   
Zfish   226 DEVQVPWGKGIIGYVAEHGETVNIPDAYQDHRFSDEIDKLTGYKTKSLLCMPIHNSDGEVIGVAQ 290

  Fly   646 ----NPPGAPLSQGEE--------------AYTRLATDTIEELDWCLDQLETI------QT---- 682
                :|.||..:|.:|              :..:|...:.:|.|.....||.:      ||    
Zfish   291 AINKSPNGALFTQDDEKVLQMYLPFCGIAISNAQLFAASRKEYDRSRALLEVVNDLFEEQTDLEK 355

  Fly   683 ------HRS-------------VSDMAS--LKFKR------------MLNKELSHFSESSRS--- 711
                  ||:             :.|:.|  :||.:            |.|.......:||.|   
Zfish   356 IVRKIMHRAQTLLKCERCSVQLLEDIESPVVKFTKSFELLSPKCSADMENSFKDSMDKSSYSDWL 420

  Fly   712 -GNQISEYICSTFL-----DKQQE--FDLPSLRVEDNPELVAANAAAGQQSAGQYARS--RSPRG 766
             .|.|:|.:.||.|     |..|:  ||                 |...|.:|.:.||  ..|..
Zfish   421 INNSIAELVASTGLPVNISDAYQDPRFD-----------------AEADQFSGFHIRSVLCVPIW 468

  Fly   767 PPMSQISGVKRPLSHTNS----------------FTGERLPTFGVE------------------- 796
            ....||.||.:.|:..:.                |.|     .|:.                   
Zfish   469 NSNHQIIGVAQVLNRLDGKPFDDADQRLFEAFVIFCG-----LGINNTIMYDQVKKSWAKQSVAL 528

  Fly   797 -------TPRENELG-------TLLGELDTWGIQIFSIGEFSVN-RPLTCVAYTIFQSRELLTSL 846
                   |..:.|:.       .|:.||   ||...|..:||:: ..:...|..:|....::...
Zfish   529 DVLSYHATCSKTEVDKFKAANIPLVCEL---GIDKLSFDDFSLDVDAMVTAALRMFMELGMVQKF 590

  Fly   847 MIPPKTFLNFMSTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGALFAACI- 910
            .|..:|...::.|:..:| :...:||..||.:|.|....:|.|...:...|.:|. .||...|| 
Zfish   591 KIDYETLCRWLLTVRKNY-RMVLYHNWRHAFNVCQCMFSMLTTAGFQETLTEMET-LALIVGCIC 653

  Fly   911 HDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMV 975
            ||:||.|..|.|...:.|.|:|:|...:.||:||...|..:||::|.:||.|:...:...|.:::
Zfish   654 HDLDHRGTNNAFQAKTGSALSLLYGTSATLEHHHFNHAVMILQSEGHNIFSNLSSHEYGELMQLL 718

  Fly   976 IDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLY 1040
            ...:|:||::.:..   :..:..|   :...|....:....|......|:...||...|||..:.
Zfish   719 KQSILATDLTLYFQ---NRNSFFE---LVNKGEYNWNVKEHREMCRSMLMTACDLGAVTKPWEIS 777

  Fly  1041 KRWVALLMEEFFLQGDKERESGMDISP--MCDRHNA-TIEKSQVGFIDYIVHPLWETWADLVHPD 1102
            .:...|:..|||.|||:|| |.:.::|  :.||:.. .:...|:.:||.|..||:||:|.| :|.
Zfish   778 HKVAELVTSEFFEQGDRER-SELKLTPSAIFDRNRKDELPGLQLEWIDGICAPLYETFAKL-NPK 840

  Fly  1103 AQDILDTLEENRDYYQSM------------IPPSPPPSGVDEN 1133
            .|.::|.::.||..::.:            ||.||..:.|..:
Zfish   841 LQPMMDLIKANRAKWEELHHRHQRISQEASIPASPDHAEVSSS 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 75/244 (31%)
pde11aXP_689838.4 GAF 170..330 CDD:214500 22/159 (14%)
GAF 352..518 CDD:214500 35/187 (19%)
PDEase_I 613..849 CDD:278654 75/244 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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