DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnc and pde6b

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_685002.1 Gene:pde6b / 559332 ZFINID:ZDB-GENE-090421-2 Length:854 Species:Danio rerio


Alignment Length:395 Identity:97/395 - (24%)
Similarity:179/395 - (45%) Gaps:34/395 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   798 PRENELGTLLGEL-------DTWGIQIFSIGEFSVNR-PLTCVAYTIFQSRELLTSLMIPPKTFL 854
            ||:.|...||..|       ..:.|..|...:|.... .|......::....::....:|.:..:
Zfish   478 PRDCEEEELLEILKKELPGPKKFEIYAFHFSDFDCTELQLVMCGIQMYYEVGVVKKFQVPQEVLV 542

  Fly   855 NFMSTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLT 919
            .||.::...| :...:||..|..:|.|:...||.|..|:..:|.|||...:.|..:||:||.|..
Zfish   543 RFMYSVSKGY-RRITYHNWRHGFNVGQTMFTLLTTGKLKQYYTDLEVMAMITAGFLHDIDHRGTN 606

  Fly   920 NQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDM 984
            |.:.|.|.:.||.::. .|:||.|||.....||..:..:||.|:.::|.:.:..::...:::||:
Zfish   607 NLYQVKSQNPLAKLHG-SSILERHHLEFGKFLLGEESLNIFQNLNRRQTEHVFHLIDIAIIATDL 670

  Fly   985 S---KHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQ-VLENLVHCADLSNPTKPLPLYKRWVA 1045
            :   |..::...:..:.||.:.....:..:...|.|.: |:..::...|||..|||..:..:...
Zfish   671 ALYFKKRTMFQKIVDLSETYEERKKWIDFMSLETTRKEIVMAMMMTACDLSAITKPWEVQSKVAL 735

  Fly  1046 LLMEEFFLQGDKERE-SGMDISPMCDRHNAT-IEKSQVGFIDYIVHPLWETWADLVHPDAQDILD 1108
            .:..||:.|||.||. ......||.||:.|. :.|.|.||||::...:::.::.. ||:.:.:.|
Zfish   736 SVAAEFWEQGDLERTVLEQQPIPMMDRNKAAELPKLQCGFIDFVCTFVYKEFSRF-HPEIKPMFD 799

  Fly  1109 TLEENRDYYQSMIPPSPPPSGVDENPQEDRIRFQVTLEESDQENLAELEEGDESGGESTTTGTTG 1173
            .:..||.:::..              ||:   ::..|:..::...|..|...::...|.:||.:|
Zfish   800 GILNNRMHWKER--------------QEE---YEAKLKAMEEAVKARQEAAAKNAANSNSTGGSG 847

  Fly  1174 TTAAS 1178
            :...|
Zfish   848 SKTCS 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 71/246 (29%)
pde6bXP_685002.1 GAF 72..210 CDD:214500
GAF 253..440 CDD:214500
PDEase_I 557..801 CDD:278654 71/245 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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