DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnc and pde4bb

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_009296519.1 Gene:pde4bb / 555599 ZFINID:ZDB-GENE-070912-454 Length:707 Species:Danio rerio


Alignment Length:718 Identity:393/718 - (54%)
Similarity:488/718 - (67%) Gaps:77/718 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   473 SSSASALATS-------HPSNSQLLPTSKMQAEQG------------SIGDLQKYHSRYLKNRRH 518
            :||.:.|...       |.....|.|.|..|||:.            |:|        ::...|.
Zfish    23 TSSGATLGVDLWRCPRRHSGTLVLPPLSWRQAERARSPQEDNVSRPTSLG--------FITPPRI 79

  Fly   519 TLANV---RFDVENGQG-ARSPLE-GGSPSAGLVLQ----NLPQRRESFLYRSDSDFEMSPKSMS 574
            .:..|   ..:||||.. ..|||: ..||::||:|.    :..|||||||||||||:::||||.|
Zfish    80 DITPVPPDSLEVENGPSIGCSPLDLQVSPASGLILHPSMASHSQRRESFLYRSDSDYDLSPKSTS 144

  Fly   575 RNSSIASERFKEQEASILVDRSHGEDLIVTPFAQILASLRSVRNNLLSLTNVPASNKSRRPNQSS 639
            ||||:..|:.            ||||||||||||:|||||:||||...||||...:..|.|    
Zfish   145 RNSSLVGEQL------------HGEDLIVTPFAQVLASLRTVRNNFSILTNVSCPSSKRSP---- 193

  Fly   640 SASRSGNPPGAPLSQGEEAYTRLATDTIEELDWCLDQLETIQTHRSVSDMASLKFKRMLNKELSH 704
               .|.:.|....:..:|:|.:||.:|:|||||||||||||||:||||||||.|||||||:||:|
Zfish   194 ---ISSHGPVTKANLSDESYQKLALETMEELDWCLDQLETIQTYRSVSDMASNKFKRMLNRELTH 255

  Fly   705 FSESSRSGNQISEYICSTFLDKQQEFDLPSLRVEDNPELVAANAAAGQQSAGQYARSRSPRGPP- 768
            .||.||||||:||:|.:||||||.|.::|.    ..|:                :|.|..|... 
Zfish   256 LSEMSRSGNQVSEFISNTFLDKQNELEIPL----STPK----------------SRERKKRQQQL 300

  Fly   769 MSQISGVKRPLSHTNSFTGERLPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTCVA 833
            |:|||||::....:...:......|||:|..|:.|...|.:::.||:.||.:.|.|.:|||.|:.
Zfish   301 MTQISGVRKVTHGSGPSSSCSTTRFGVKTDSEDMLSKDLEDINKWGLNIFKVAEHSHHRPLACIM 365

  Fly   834 YTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTP 898
            |.|||.|:|:.:..||..||:.:|.||||||..|..:|||||||||.|||::||:||||:.|||.
Zfish   366 YAIFQERDLMKTFKIPVDTFVTYMMTLEDHYHADVAYHNSLHAADVAQSTHILLSTPALDAVFTD 430

  Fly   899 LEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIFCNM 963
            ||:..|||||.||||||||::||||:|::||||||||||||||||||||.|||||.:.||:|.|:
Zfish   431 LEILAALFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQGENCDLFQNL 495

  Fly   964 QKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQVLENLVHCA 1028
            .||:|||||||||.:||:||||||||||||||||||||||..||||||||||||||||.|:||||
Zfish   496 SKKERQTLRKMVIHMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCA 560

  Fly  1029 DLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHNATIEKSQVGFIDYIVHPLWE 1093
            |||||||||.|||:|...:|:|||.|||:|||.||:||||||:|.|::|||||||||||||||||
Zfish   561 DLSNPTKPLDLYKQWTDRIMQEFFHQGDRERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWE 625

  Fly  1094 TWADLVHPDAQDILDTLEENRDYYQSMIPPSP-PPSGVDENPQEDRIRFQVTLEESDQENLAELE 1157
            |||||||||||||||||||||::|.||||.|| ||.....:|..|:.:|::.:||..:::...|.
Zfish   626 TWADLVHPDAQDILDTLEENRNWYYSMIPQSPSPPFFEAGSPSGDKFQFELEVEEGAKQDTKNLS 690

  Fly  1158 EGD 1160
            :.|
Zfish   691 KTD 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 192/240 (80%)
pde4bbXP_009296519.1 PDEase_I 402..643 CDD:278654 192/240 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580638
Domainoid 1 1.000 411 1.000 Domainoid score I651
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 757 1.000 Inparanoid score I535
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 1 1.000 - - FOG0000302
OrthoInspector 1 1.000 - - otm25732
orthoMCL 1 0.900 - - OOG6_100782
Panther 1 1.100 - - O PTHR11347
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X171
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.760

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