DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnc and Pde4a

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:NP_037233.4 Gene:Pde4a / 25638 RGDID:3279 Length:844 Species:Rattus norvegicus


Alignment Length:663 Identity:394/663 - (59%)
Similarity:475/663 - (71%) Gaps:60/663 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   524 RFDVENG---QGARSPLEGGSPSAGLVLQ---NLPQRRESFLYRSDSDFEMSPKSMSRNSSIASE 582
            |.:.|||   ...||||: ...|.||||.   ...|||||||||||||::||||::||:||:|||
  Rat   102 RLEAENGPTPSPGRSPLD-SQASPGLVLHAGATTSQRRESFLYRSDSDYDMSPKAVSRSSSVASE 165

  Fly   583 RFKEQEASILVDRSHGEDLIVTPFAQILASLRSVRNNLLSLTNVPASNKSRRPNQSSSASRSGNP 647
                         :|.||||||||||:||||||||:|...|||||..:..|.|        .|.|
  Rat   166 -------------AHAEDLIVTPFAQVLASLRSVRSNFSLLTNVPIPSNKRSP--------LGGP 209

  Fly   648 PG---APLSQGEEAYTRLATDTIEELDWCLDQLETIQTHRSVSDMASLKFKRMLNKELSHFSESS 709
            |.   |.||  ||...:||.:|:|||||||:||||:||:||||:|||.|||||||:||:|.||.|
  Rat   210 PSVCKATLS--EETCQQLARETLEELDWCLEQLETMQTYRSVSEMASHKFKRMLNRELTHLSEMS 272

  Fly   710 RSGNQISEYICSTFLDKQQEFDLPSLRVEDNPELVAANAAAGQQSAGQYARSRSPRGPPMSQISG 774
            |||||:||||.:||||||.|.::||    ..|.         |::..|...|...:..|||||:|
  Rat   273 RSGNQVSEYISNTFLDKQNEVEIPS----PTPR---------QRAFQQPPPSVLRQSQPMSQITG 324

  Fly   775 VKRPLSHTNSFTGERLPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTCVAYTIFQS 839
            :|: |.||.|. ...:|.|||:|.:|:.|...|..|..||:.||.:.|::..|.|:|:.|||||.
  Rat   325 LKK-LVHTGSL-NTNVPRFGVKTDQEDLLAQELENLSKWGLNIFCVSEYAGGRSLSCIMYTIFQE 387

  Fly   840 RELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGA 904
            |:||....||..|.:.:|.||||||..|..:|||||||||.|||:|||.||||:.|||.||:..|
  Rat   388 RDLLKKFHIPVDTMMMYMLTLEDHYHADVAYHNSLHAADVLQSTHVLLATPALDAVFTDLEILAA 452

  Fly   905 LFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIFCNMQKKQRQ 969
            ||||.||||||||::||||:|::||||||||||||||||||||.|||||.:.||||.|:.|:|||
  Rat   453 LFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEENCDIFQNLSKRQRQ 517

  Fly   970 TLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQVLENLVHCADLSNPT 1034
            :|||||||:||:|||||||:||||||||||||||..|||||||||:||||||.|:||||||||||
  Rat   518 SLRKMVIDMVLATDMSKHMTLLADLKTMVETKKVTSSGVLLLDNYSDRIQVLRNMVHCADLSNPT 582

  Fly  1035 KPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHNATIEKSQVGFIDYIVHPLWETWADLV 1099
            |||.||::|...:|.|||.|||:|||.||:||||||:|.|::|||||||||||||||||||||||
  Rat   583 KPLELYRQWTDRIMAEFFQQGDRERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLV 647

  Fly  1100 HPDAQDILDTLEENRDYYQSMI--PPSPP----PSGVDENPQEDRIRFQVTLEESDQENLAELEE 1158
            ||||||||||||:|||:|.|.|  .||||    |.|:......|:.:|::||||.::|:..|:. 
  Rat   648 HPDAQDILDTLEDNRDWYHSAIRQSPSPPLEEEPGGLGHPSLPDKFQFELTLEEEEEEDSLEVP- 711

  Fly  1159 GDESGGESTTTGT 1171
                 |..||..|
  Rat   712 -----GLPTTEET 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 191/240 (80%)
Pde4aNP_037233.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..124 8/22 (36%)
PDE4_UCR 173..288 CDD:407935 77/124 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 296..317 6/33 (18%)
PDEase_I 418..659 CDD:395177 191/240 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 668..690 7/21 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 818..844
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 408 1.000 Domainoid score I676
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 743 1.000 Inparanoid score I559
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 1 1.000 - - FOG0000302
OrthoInspector 1 1.000 - - otm44825
orthoMCL 1 0.900 - - OOG6_100782
Panther 1 1.100 - - O PTHR11347
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X171
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

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