DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnc and Pde11a

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_006499516.1 Gene:Pde11a / 241489 MGIID:3036251 Length:1011 Species:Mus musculus


Alignment Length:1196 Identity:237/1196 - (19%)
Similarity:403/1196 - (33%) Gaps:358/1196 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 LEKSAEQKRDLLERNNKE---DDLLNRTVSG----------------SELDLYG--GAGGGTKKH 175
            |::..|...|.|.|..|:   |..|.|..||                ::.:..|  |.|||....
Mouse    15 LDRHPELFEDYLMRKGKQELVDKWLQRHTSGQGASSLRPALAGASSLAQSNAKGSPGIGGGAGPQ 79

  Fly   176 SLADTIDT-----SVTTPISLKTLINDVDEELDQQLSAADIAAASLASGLVARRAEPETLSDASV 235
            ..|.:..|     |...|:|                  ...|:.|...|.:.|||..:.|..:..
Mouse    80 GSAHSHPTPGGGESAGVPLS------------------PSWASGSRGDGSLQRRASQKELRKSFA 126

  Fly   236 SPTAVVQQQQQQQQ---QLQQP--------LLQSQPHFVPSSGNILSQVTLYSGSNPSTNPCQSA 289
            ...|:...:...:|   :.|:|        ||:......|::.:|||.:.               
Mouse   127 RSKAIHVNRTYDEQVTSRAQEPLSSVRRRALLRKASSLPPTTAHILSALL--------------- 176

  Fly   290 VQNQGQNSNPNPNQNPNTNPNQNQQRCSCQPQTSPLPHIKEEEE--------SDQANFKHQTSLK 346
                  .|..|..|.|   |.....:|          |:|:..|        .|.:|....|||.
Mouse   177 ------ESRVNLPQYP---PTAIDYKC----------HLKKHNERQFFLELVKDISNDLDLTSLS 222

  Fly   347 EHQPLPPPITIATGYCGSCESVHHSSATSSSAGTVPPGGQQTQ-----EYIAGTSSTP--SPRIK 404
            ....:...:.:....| |...|..::|           |::|.     :..|||...|  |....
Mouse   223 YKILIFVCLMVDADRC-SLFLVEGAAA-----------GKKTLVSKFFDVHAGTPLLPCSSTENS 275

  Fly   405 LKFRKPHKSCWSRIVLAPIGSAGGSSSATTVIG----SNSNETLASSSTTGGTATTTQNSSSVSV 465
            .:.:.|    |.:.::..:|..|.:.:......    ::..:.|....|........:||....:
Mouse   276 NEVQVP----WGKGIIGYVGEHGETVNIPDAYQDRRFNDEIDKLTGYKTKSLLCMPIRNSDGEII 336

  Fly   466 AAHHRLTSSSASALATSHP---------------SNSQLLPTSKMQAEQGSI------------G 503
            .....:......|..|...               ||:||...|:.:.|:...            .
Mouse   337 GVAQAINKVPEGAPFTEDDEKVMQMYLPFCGIAISNAQLFAASRKEYERSRALLEVVNDLFEEQT 401

  Fly   504 DLQKYHSRYLKNRRHTLANVRFDVENGQGARSPLEGGSPSAGLVLQNLPQRRESFLYRSDSDFE- 567
            ||:|...:.:...:..|...|..|                  |:|:::    ||.:.:....|| 
Mouse   402 DLEKIVKKIMHRAQTLLKCERCSV------------------LLLEDI----ESPVVKFTKSFEL 444

  Fly   568 MSPKSMSRNSSIASERFKEQEASILVDRSHGED-LIVTPFAQILASLRSVRNNLLSLTNVP--AS 629
            ||||.    |:.|...|||.     |::|...| ||....|:::||           |.:|  .|
Mouse   445 MSPKC----SADAENSFKES-----VEKSSYSDWLINNSIAELVAS-----------TGLPVNVS 489

  Fly   630 NKSRRPNQSSSASRSGNPPGAPLSQGEEAYTRLATDTIEELDWCLDQLETIQTHRSV-------S 687
            :..:.|...:.|                                 ||:..... |||       |
Mouse   490 DAYQDPRFDAEA---------------------------------DQISGFHI-RSVLCVPIWNS 520

  Fly   688 DMASLKFKRMLNK-ELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSLRVEDNPELVAANAAAG 751
            :...:...::||: :...|.::.:...:.....|...::....:|                    
Mouse   521 NHQIIGVAQVLNRLDGKPFDDADQRLFEAFVIFCGLGINNTIMYD-------------------- 565

  Fly   752 QQSAGQYARSRSPRGPPMSQIS-GVKRPLSHTNSFTGERLPTFGVETPRENELGTLLGELDTWGI 815
                 |..:|.:.:...:..:| ......:..:.|....:|              |:.||   .|
Mouse   566 -----QVKKSWAKQSVALDVLSYHATCSKAEVDKFKAANIP--------------LVSEL---AI 608

  Fly   816 QIFSIGEFSVN-RPLTCVAYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLHAADV 879
            ......:||:: ..:...|..:|....::....|..:|...::.|:..:| :...:||..||.:|
Mouse   609 DDIHFDDFSLDVDAMITAALRMFMELGMVQKFKIDYETLCRWLLTVRKNY-RMVLYHNWRHAFNV 672

  Fly   880 TQSTNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHH 944
            .|....:|.|...:.:.|.:|:...:.....||:||.|..|.|...|.|.||.:|...:.||:||
Mouse   673 CQLMFAMLTTAGFQEILTEVEILAVIVGCLCHDLDHRGTNNAFQAKSDSALAQLYGTSATLEHHH 737

  Fly   945 LAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVL 1009
            ...|..:||::|.:||.|:..|:...|.:::...:|:||::.:.....:...:|.    .|....
Mouse   738 FNHAVMILQSEGHNIFANLSSKEYSDLMQLLKQSILATDLTLYFERRTEFFELVR----KGDYDW 798

  Fly  1010 LLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISP--MCDRH 1072
            .:.::.|..:.:  |:...||...|||..:.::...|:..|||.|||:|| |.:.::|  :.||:
Mouse   799 SITSHRDVFRSM--LMTACDLGAVTKPWEISRQVAELVTSEFFEQGDRER-SELKLTPSAIFDRN 860

  Fly  1073 NA-TIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIPPSPPPSGVDENPQE 1136
            .. .:.:.|:.:||.|..||                         |||:......|..:.|:.: 
Mouse   861 RKDELPRLQLEWIDSICMPL-------------------------YQSIGSNIRGPEFLTESTE- 899

  Fly  1137 DRIRFQVTLEESDQENLAELEEGDESGGESTTTGTTGTTAASALSGAGGG--------GGGG--- 1190
              :.|.|.|.||                 .||.|..|.:.....:|.|.|        |..|   
Mouse   900 --LAFFVYLNES-----------------LTTGGWEGDSLLLFFAGLGEGQCKTETNAGFSGCQP 945

  Fly  1191 ---GGMAPR--TG-GCQNQP--QHGG 1208
               |.:||:  || ||..:|  .|||
Mouse   946 KEVGRVAPKKTTGLGCLPRPCQSHGG 971

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 66/243 (27%)
Pde11aXP_006499516.1 GAF 217..380 CDD:214500 28/178 (16%)
GAF 402..568 CDD:214500 46/266 (17%)
PDEase_I 663..885 CDD:365964 69/253 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.