DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnc and Pde6a

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:NP_666198.1 Gene:Pde6a / 225600 MGIID:97524 Length:860 Species:Mus musculus


Alignment Length:418 Identity:114/418 - (27%)
Similarity:189/418 - (45%) Gaps:61/418 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   800 ENELGTLL-GEL---DTWGIQIFSIGEFSVNRPLT------CVAYTIFQSRELLTSLMIPPKTFL 854
            |.||..:| |||   :::.|..|...:.    |||      |.....::.| ::....||.:..:
Mouse   484 EEELAEILQGELPDAESYEINKFHFSDL----PLTELELVKCGIQMYYELR-VVDKFHIPQEALV 543

  Fly   855 NFMSTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLT 919
            .||.:|...| :...:||..|..:|.|:...||.|..|:..||.||....:.||..||:||.|..
Mouse   544 RFMYSLSKGY-RRITYHNWRHGFNVGQTMFSLLVTGKLKRYFTDLEALAMVTAAFCHDIDHRGTN 607

  Fly   920 NQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDM 984
            |.:.:.|.:.||.::. .|:||.|||.....||:::..:||.|:.::|.:....|:...:::||:
Mouse   608 NLYQMKSQNPLAKLHG-SSILERHHLEFGKTLLRDESLNIFQNLNRRQHEHAIHMMDIAIIATDL 671

  Fly   985 SKHMSLLADLKTMVETKKVAGS-----GVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWV 1044
            :.:.......:.:|:..|...|     ..::|:.....| |:..::...|||..|||..:..:..
Mouse   672 ALYFKKRTMFQKIVDQSKTYESTQEWTQYMMLEQTRKEI-VMAMMMTACDLSAITKPWEVQSKVA 735

  Fly  1045 ALLMEEFFLQGDKERE-SGMDISPMCDRHNA-TIEKSQVGFIDYIVHPLWETWADLVHPDAQDIL 1107
            .|:..||:.|||.||. ...:..||.||:.| .:.|.||||||::...:::.::.. |.:...:|
Mouse   736 LLVAAEFWEQGDLERTVLQQNPIPMMDRNKADELPKLQVGFIDFVCTFVYKEFSRF-HEEITPML 799

  Fly  1108 DTLEENRDYYQSMIPPSPPPSGVDENPQEDRIRFQVTLEESDQENLAELEEGDESGGESTTTGTT 1172
            |.:..||..::::         .||  .|.:::   .|||..|:..|                  
Mouse   800 DGITNNRKEWKAL---------ADE--YEAKMK---ALEEEKQKQQA------------------ 832

  Fly  1173 GTTAASALSGAGGGGGGGGGMAPRTGGC 1200
               |..|.||...||....|.||.:..|
Mouse   833 ---AKQAASGNQPGGNPTPGGAPASKSC 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 74/247 (30%)
Pde6aNP_666198.1 GAF 67..232 CDD:214500
GAF 254..441 CDD:214500
PDEase_I 558..802 CDD:278654 74/246 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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