DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnc and Pde2a

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_006507586.1 Gene:Pde2a / 207728 MGIID:2446107 Length:953 Species:Mus musculus


Alignment Length:843 Identity:188/843 - (22%)
Similarity:311/843 - (36%) Gaps:231/843 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   452 GTATTTQNSSSVSVAAHHRLTSSSASALATSHPSNSQ--LLPTSKMQAEQGSIGDLQKYHSRYLK 514
            |..:.::..|...|..|..:......||....|...|  .:..|:.|.::....|    |.|.:.
Mouse   183 GQLSDSEEQSLQVVEKHALVALRRVQALQQRRPEAVQNTSVDASEDQKDEKGYTD----HDRKIL 243

  Fly   515 NRRHTLANVRFDVENGQGARSPLEGGSPSAGL-VLQNLPQRRES----FLYRSDSDFEMSPKSMS 574
            .    |....||::            :.|..| |||.|.|..::    .|..|:.:.::|.|   
Mouse   244 Q----LCGELFDLD------------ATSLQLKVLQYLQQETQATHCCLLLVSEDNLQLSCK--- 289

  Fly   575 RNSSIASERFKEQEASILVDRSHGED----LIVTPFAQILASLRSVR------------NNLL-- 621
                            ::.|:..||:    |.:....|::...:.::            .|:|  
Mouse   290 ----------------VIGDKVLGEEVSFPLTMGRLGQVVEDKQCIQLKDLTSDDVQQLQNMLGC 338

  Fly   622 ---SLTNVPASNKSRRPNQSSSASRSGNPPGAPLSQGEEAYTRLATDTIEELDWCLDQLETIQTH 683
               ::..||..  ||..:|..:.:.:.|..|......|:.:.         :..|.....|:.| 
Mouse   339 ELQAMLCVPVI--SRATDQVVALACAFNKLGGDFFTDEDEHV---------IQHCFHYTGTVLT- 391

  Fly   684 RSVSDMASLKFKRM---------LNKEL-SHFSESS--------RSGNQISEYICSTFLDKQQE- 729
               |.:|..|.:::         :.|.| :|..:.|        .:.|..:..|||.||..|.| 
Mouse   392 ---STLAFQKEQKLKCECQALLQVAKNLFTHLDDVSVLLQEIITEARNLSNAEICSVFLLDQNEL 453

  Fly   730 ----FDLPSLRVEDNPELVAANAAAGQQSAGQYARSRSPRGPPMSQISGVKRPLSH--------- 781
                ||  ...|:|  |.......|.|..||..|.:        .||..:....:|         
Mouse   454 VAKVFD--GGVVDD--ESYEIRIPADQGIAGHVATT--------GQILNIPDAYAHPLFYRGVDD 506

  Fly   782 TNSFTGERLPTFGVETPRENELGT--LLGELD-TW----------------GIQIF------SIG 821
            :..|....:..|.::...:..:|.  |:.::: .|                ||.|.      .:.
Mouse   507 STGFRTRNILCFPIKNENQEVIGVAELVNKINGPWFSKFDEDLATAFSIYCGISIAHSLLYKKVN 571

  Fly   822 EFSVNRPLT--CVAYTIFQSRELLTSLM---IPP-----KTFLNF----------------MSTL 860
            |......|.  .:.|.:..|.:..|.|:   |.|     ..|.||                :|.|
Mouse   572 EAQYRSHLANEMMMYHMKVSDDEYTKLLHDGIQPVAAIDSNFANFTYTPRSLPEDDTSMAILSML 636

  Fly   861 ED-----HY-----------------VKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGG 903
            :|     :|                 .:|.|:||.:||..|:....:|.....|......:|: .
Mouse   637 QDMNFINNYKIDCPTLARFCLMVKKGYRDPPYHNWMHAFSVSHFCYLLYKNLELSNYLEDIEI-F 700

  Fly   904 ALFAACI-HDVDHPGLTNQFLVNSSSELALMYNDE-SVLENHHLAVAFKLLQNQGCDIFCNMQKK 966
            |||.:|: ||:||.|..|.|.|.|.|.||.:|:.| ||:|.||.|.|..:|...||:||.:..:|
Mouse   701 ALFISCMCHDLDHRGTNNSFQVASKSVLAALYSSEGSVMERHHFAQAIAILNTHGCNIFDHFSRK 765

  Fly   967 QRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQVLENLVHC---- 1027
            ..|.:..::.||:|:||::.|:.:..||:.|.|.            .|....:....|:.|    
Mouse   766 DYQRMLDLMRDIILATDLAHHLRIFKDLQKMAEV------------GYDRNNRQHHRLLLCLLMT 818

  Fly  1028 -ADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHNATIEKSQVGFIDYIVHPL 1091
             .|||:.||.....::...|:.:|||.|||.|:..|.....|.||..|.|.:.|:.|:::|..|:
Mouse   819 SCDLSDQTKGWKTTRKIAELIYKEFFSQGDLEKAMGNRPMEMMDREKAYIPELQISFMEHIAMPI 883

  Fly  1092 WETWADLVHPDAQDILDTLEENRDYYQSM-----IPPSPPPSGVD------ENPQEDRIRFQV 1143
            ::...|| .|.|.::.:.:..||:::..:     |...|..:.:|      |.|..|..|..|
Mouse   884 YKLLQDL-FPKAAELYERVASNREHWTKVSHKFTIRGLPSNNSLDFLDEEYEVPDLDGTRAPV 945

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 80/247 (32%)
Pde2aXP_006507586.1 GAF 253..400 CDD:214500 32/192 (17%)
GAF 422..571 CDD:214500 30/160 (19%)
PDEase_I 668..901 CDD:365964 80/246 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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