DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnc and Pde9a

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:NP_612552.1 Gene:Pde9a / 191569 RGDID:621035 Length:534 Species:Rattus norvegicus


Alignment Length:491 Identity:125/491 - (25%)
Similarity:228/491 - (46%) Gaps:67/491 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   684 RSVSDMASLKFKRMLNKELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSLRVEDNPELVAANA 748
            :.||:...| .:.:|.:....||.:.:. |::...:.:.....::..:|..|:|.:..:..:...
  Rat    84 KQVSEREEL-VQGVLAQVAEQFSRAFKI-NELKAEVANHLAMLEKRVELEGLKVVEIEKCKSDIK 146

  Fly   749 AAGQQSAGQYARSRSP---------RGPPMSQISGVKRPLSHTNSFTGERLPTFGVETPRENELG 804
            ...::.|.:..|:..|         :..|...:....:.|....:....|.|||.|.....||:.
  Rat   147 KMREELAARNNRTNCPCKYSFLDNKKLTPRRDVPTYPKYLLSPETIEALRKPTFDVWLWEPNEML 211

  Fly   805 TLLGEL--DTWGIQIFSIGEFSVNRPLTCVAYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVKD 867
            :.|..:  |...::.|||...::.|.|.||                            .|:| :.
  Rat   212 SCLEHMYHDLGLVRDFSINPITLRRWLLCV----------------------------HDNY-RS 247

  Fly   868 NPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELAL 932
            |||||..|...|||....::....|:..|:.:::...:.||..||:||||..|.:.:|:.:|||:
  Rat   248 NPFHNFRHCFCVTQMMYSMVWLCGLQEKFSQMDILVLMTAAICHDLDHPGYNNTYQINARTELAV 312

  Fly   933 MYNDESVLENHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTM 997
            .|||.|.|||||.|:||::|....|:||.::..:..:.:|:.:|.::|:|||::|..::...|..
  Rat   313 RYNDISPLENHHCAIAFQILARPECNIFASVPPEGFRQIRQGMITLILATDMARHAEIMDSFKEK 377

  Fly   998 VETKKVAGSGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESG 1062
            :|....:....|.|      ::::  |:.|.|:||..:|:.:.:.||..|:||:|:|.|:|:..|
  Rat   378 MENFDYSNEEHLTL------LKMI--LIKCCDISNEVRPMEVAEPWVDCLLEEYFMQSDREKSEG 434

  Fly  1063 MDISPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIPPSPP- 1126
            :.::|..||...|...:|:|||.:::.|::||...|.....:.:|..|.|:|::|:.:...... 
  Rat   435 LPVAPFMDRDKVTKATAQIGFIKFVLIPMFETVTKLFPIVEETMLRPLWESREHYEELKQLDDAM 499

  Fly  1127 ----------PSGVDENPQEDRIRFQVTLEESDQEN 1152
                      .||..||..|.      |.:..|.|:
  Rat   500 KELQKKTENLTSGATENAPEK------TRDAKDNED 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 78/240 (33%)
Pde9aNP_612552.1 PDEase_I 250..478 CDD:278654 77/235 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..534 8/36 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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