DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnc and Pde6b

DIOPT Version :10

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:NP_032832.2 Gene:Pde6b / 18587 MGIID:97525 Length:856 Species:Mus musculus


Alignment Length:415 Identity:105/415 - (25%)
Similarity:190/415 - (45%) Gaps:58/415 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   788 ERLPT---FGVETP--RENELGTLLGELDTWGIQIFSIGEFSVNRPLTCV-------AYTIFQSR 840
            |.|||   .|.|..  .|:|||.:|.| :..|...|.|.||..: .|.|.       ...::...
Mouse   465 EILPTRDRLGKEPADCEEDELGKILKE-ELPGPTKFDIYEFHFS-DLECTELELVKCGIQMYYEL 527

  Fly   841 ELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGAL 905
            .::....||.:..:.|:.::...| :...:||..|..:|.|:...||.|..|:..:|.||....:
Mouse   528 GVVRKFQIPQEVLVRFLFSVSKAY-RRITYHNWRHGFNVAQTMFTLLMTGKLKSYYTDLEAFAMV 591

  Fly   906 FAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIFCNMQKKQRQT 970
            .|...||:||.|..|.:.:.|.:.||.::. .|:||.|||.....||..:..:|:.|:.::|.:.
Mouse   592 TAGLCHDIDHRGTNNLYQMKSQNPLAKLHG-SSILERHHLEFGKFLLAEESLNIYQNLNRRQHEH 655

  Fly   971 LRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQ--------------VL 1021
            :..::...:::||::.:.......:.:|:..|          ||.|:..              |:
Mouse   656 VIHLMDIAIIATDLALYFKKRTMFQKIVDESK----------NYEDKKSWVEYLSLETTRKEIVM 710

  Fly  1022 ENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDIS--PMCDRHNAT-IEKSQVGF 1083
            ..::...|||..|||..:..:...|:..||:.|||.|| :.:|..  ||.||:.|. :.|.||||
Mouse   711 AMMMTACDLSAITKPWEVQSKVALLVAAEFWEQGDLER-TVLDQQPIPMMDRNKAAELPKLQVGF 774

  Fly  1084 IDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIPPSPPPSGVDENPQEDRIRFQVTLEES 1148
            ||::...:::.::.. |.:...:.|.|:.||..::::         .||  .|.:::.....::.
Mouse   775 IDFVCTFVYKEFSRF-HEEILPMFDRLQNNRKEWKAL---------ADE--YEAKVKALEEEKKK 827

  Fly  1149 DQENLAELEEGDE--SGGESTTTGT 1171
            :::.:|..:.|.|  :||.:..:.|
Mouse   828 EEDRVAAKKVGTEVCNGGPAPKSST 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDE4_UCR 603..725 CDD:465648
PDEase_I 870..1110 CDD:459723 70/256 (27%)
Pde6bNP_032832.2 GAF 71..230 CDD:214500
GAF 252..439 CDD:214500
PDEase_I 556..800 CDD:459723 70/256 (27%)
Blue background indicates that the domain is not in the aligned region.

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