DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnc and Pde7a

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:NP_001116231.1 Gene:Pde7a / 18583 MGIID:1202402 Length:482 Species:Mus musculus


Alignment Length:535 Identity:144/535 - (26%)
Similarity:237/535 - (44%) Gaps:79/535 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   626 VPASNKSRRP--NQSSSASRSGNPPGAPLSQGEEAYTRLATDTIEELDWCLDQLETIQTHRSVSD 688
            ||....|||.  :.|||::..|.|....|||...|   ::.|:                    ||
Mouse    16 VPQHVLSRRGAISFSSSSALFGCPHPRQLSQRRGA---ISYDS--------------------SD 57

  Fly   689 MASLKFKRMLN----KELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSLRVEDNPELVAANAA 749
            ..:| :.|||.    :..:.| |:.|.|:.  .||.......|.:.:..          |:|...
Mouse    58 QTAL-YIRMLGDVRVRSRAGF-ETERRGSH--PYIDFRIFHSQSDIEAS----------VSARNI 108

  Fly   750 AGQQSAGQYAR-SRSPRGPPMSQISGVKRPLSHTNSFTGERLPTFGVETPRENELGTLLGELDTW 813
            ....|..:|.| ||..||..:.....:                   ::.....:...:|.::..|
Mouse   109 RRLLSFQRYLRSSRVFRGATVCSSLDI-------------------LDEDYNGQAKCMLEKVGNW 154

  Fly   814 GIQIFSIGEFSVNRPLTCVAYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLHAAD 878
            ...||.....:....|..:.:.:|....|:....:.......|:..:::.|...||:||::||||
Mouse   155 NFDIFLFDRLTNGNSLVSLTFHLFSLHGLIEYFHLDMVKLRRFLVMIQEDYHSQNPYHNAVHAAD 219

  Fly   879 VTQSTNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENH 943
            |||:.:..|..|.|....||.::..:|.||..||:||||:...||:.::..||.:|.:.||||||
Mouse   220 VTQAMHCYLKEPKLASSVTPWDILLSLIAAATHDLDHPGVNQPFLIKTNHYLATLYKNSSVLENH 284

  Fly   944 HLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGV 1008
            |...|..||:..|  :|.::..:.||.:...:..::|:||:|:....|:..::.::      .|.
Mouse   285 HWRSAVGLLRESG--LFSHLPLESRQEMEAQIGALILATDISRQNEYLSLFRSHLD------KGD 341

  Fly  1009 LLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHN 1073
            |.||:...|..||:..:.|||:.||.:...|.|:|...:.||||.|||.|::..:.:||:|||..
Mouse   342 LHLDDGRHRHLVLQMALKCADICNPCRNWELSKQWSEKVTEEFFHQGDIEKKYHLGVSPLCDRQT 406

  Fly  1074 ATIEKSQVGFIDYIVHPLWETWADLVHPD-AQDILDTLEENRDYYQSMIPPSPPPSGVDENPQED 1137
            .:|...|:||:.|:|.||:..||...... :|.:|..:..|:..::.:  ....||..|.|    
Mouse   407 ESIANIQIGFMTYLVEPLFTEWARFSDTRLSQTMLGHVGLNKASWKGL--QRQQPSSEDAN---- 465

  Fly  1138 RIRFQVTLEESDQEN 1152
             ..|::..:...|||
Mouse   466 -AAFELNSQLLTQEN 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 87/241 (36%)
Pde7aNP_001116231.1 Endonuc-BglII <51..128 CDD:286304 23/110 (21%)
PDEase_I 211..431 CDD:278654 85/227 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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