DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnc and Pde4a

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:NP_899668.1 Gene:Pde4a / 18577 MGIID:99558 Length:844 Species:Mus musculus


Alignment Length:648 Identity:392/648 - (60%)
Similarity:470/648 - (72%) Gaps:54/648 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   524 RFDVENG---QGARSPLEGGSPSAGLVLQ---NLPQRRESFLYRSDSDFEMSPKSMSRNSSIASE 582
            |.:.|||   ...||||: ...|.||:|.   ...|||||||||||||::||||:||||||:|||
Mouse   102 RLEAENGPTPSPGRSPLD-SQASPGLMLHAGAATSQRRESFLYRSDSDYDMSPKTMSRNSSVASE 165

  Fly   583 RFKEQEASILVDRSHGEDLIVTPFAQILASLRSVRNNLLSLTNVPASNKSRRPNQSSSASRSGNP 647
                         :||||||||||||:|||||:||:|...|||||..:..|.|        .|.|
Mouse   166 -------------AHGEDLIVTPFAQVLASLRNVRSNFSLLTNVPIPSNKRSP--------LGGP 209

  Fly   648 PG---APLSQGEEAYTRLATDTIEELDWCLDQLETIQTHRSVSDMASLKFKRMLNKELSHFSESS 709
            |.   |.||  ||...:||.:|:|||||||:||||:||:||||:|||.|||||||:||:|.||.|
Mouse   210 PSVCKATLS--EETCQQLARETLEELDWCLEQLETMQTYRSVSEMASHKFKRMLNRELTHLSEMS 272

  Fly   710 RSGNQISEYICSTFLDKQQEFDLPSLRVEDNPELVAANAAAGQQSAGQYARSRSPRGPPMSQISG 774
            |||||:||||.:||||||.|.::||......|......||..|             ..|||||:|
Mouse   273 RSGNQVSEYISNTFLDKQHEVEIPSPTPRQRPFQQPPPAAVQQ-------------AQPMSQITG 324

  Fly   775 VKRPLSHTNSFTGERLPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTCVAYTIFQS 839
            :|: |.||.|. ...:|.|||:|.:|:.|...|..|..||:.||.:.|::..|.|:|:.|||||.
Mouse   325 LKK-LVHTGSL-NINVPRFGVKTDQEDLLAQELENLSKWGLNIFCVSEYAGGRSLSCIMYTIFQE 387

  Fly   840 RELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGA 904
            |:||....||..|.:.:|.||||||..|..:|||||||||.|||:|||.||||:.|||.||:..|
Mouse   388 RDLLKKFHIPVDTMMTYMLTLEDHYHADVAYHNSLHAADVLQSTHVLLATPALDAVFTDLEILAA 452

  Fly   905 LFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIFCNMQKKQRQ 969
            ||||.||||||||::||||:|::||||||||||||||||||||.|||||.:.||||.|:.|:|||
Mouse   453 LFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEENCDIFQNLSKRQRQ 517

  Fly   970 TLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQVLENLVHCADLSNPT 1034
            :|||||||:||:|||||||:||||||||||||||..|||||||||:||||||.|:||||||||||
Mouse   518 SLRKMVIDMVLATDMSKHMTLLADLKTMVETKKVTSSGVLLLDNYSDRIQVLRNMVHCADLSNPT 582

  Fly  1035 KPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHNATIEKSQVGFIDYIVHPLWETWADLV 1099
            |||.||::|...:|.|||.|||:|||.||:||||||:|.|::|||||||||||||||||||||||
Mouse   583 KPLELYRQWTDRIMAEFFQQGDRERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLV 647

  Fly  1100 HPDAQDILDTLEENRDYYQSMIPPSPPPS-----GVDENPQ-EDRIRFQVTLEESDQENLAEL 1156
            ||||||||||||:|||:|.|.|..||.|:     ||..:|. .|:.:|::||||.|:|:..|:
Mouse   648 HPDAQDILDTLEDNRDWYHSAIRQSPSPTLEEEPGVLSDPALPDKFQFELTLEEEDEEDSLEV 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 191/240 (80%)
Pde4aNP_899668.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..124 8/22 (36%)
PDEase_I 418..659 CDD:278654 191/240 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 819..844
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 409 1.000 Domainoid score I695
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 744 1.000 Inparanoid score I587
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 1 1.000 - - FOG0000302
OrthoInspector 1 1.000 - - otm42764
orthoMCL 1 0.900 - - OOG6_100782
Panther 1 1.100 - - O PTHR11347
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X171
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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