DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnc and Pde5a

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_006233322.1 Gene:Pde5a / 171115 RGDID:620995 Length:865 Species:Rattus norvegicus


Alignment Length:960 Identity:186/960 - (19%)
Similarity:339/960 - (35%) Gaps:202/960 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 VQQQQQQQQQLQQPLLQSQ-----PHFVPSSGNILSQVTLYSGSNPSTNP-CQSAVQNQGQNSNP 299
            ||.|||:.|...:..|...     .:||..:..  ..|..:........| |:..::...::.:.
  Rat     9 VQSQQQRDQDWVEAWLDDHRDFTFSYFVRKATR--DMVNAWFSERVHNIPVCKEGIRAHTESCSC 71

  Fly   300 NPNQNP---NTNPNQNQQRCSCQPQTSPLPHIKEEEESDQANFKHQTSLKEHQPLPPPITIATGY 361
            :..|:|   ||.|....::.|......||..|..::.....:|...:..||..||..| ...:..
  Rat    72 SLPQSPHADNTTPGAPARKISASEFDRPLRPIVVKDSEGTVSFLSDSGKKEQMPLTSP-RFDSDE 135

  Fly   362 CGSCESVHHSSATSSSAGTVPPGGQQTQEYIAGTSSTPSPRIKLKFRKPHKSCW--SRIVLAPIG 424
            ...|..:.......||...|.....:...:|.|..|.....:.|......|..:  ||:.....|
  Rat   136 GDQCSRLLELVKDISSHLDVTALCHKIFLHIHGLISADRYSLFLVCEDSSKDKFLVSRLFDVAEG 200

  Fly   425 SAGGSSSATTVIGSNSNETLASSSTTGGTATTTQNSSSVSVAAHHRLTSSSASALATSHPSN-SQ 488
            |         .:...||..:......|             :..|         ..|...|.| ..
  Rat   201 S---------TLEEASNNCIRLEWNKG-------------IVGH---------VAAFGEPLNIKD 234

  Fly   489 LLPTSKMQAEQGSIGDLQKYHSRY-----LKNRRHTLANVRFDVENGQGARSPLEGGS------- 541
            .....:..||   :..:..|.::.     :||.|..:..|...:....|     .||:       
  Rat   235 AYEDPRFNAE---VDQITGYKTQSILCMPIKNHREEVVGVAQAINKKSG-----NGGTFTEKDEK 291

  Fly   542 ------PSAGLVLQNLPQRRESFLYRSDSDFEMSPKSMSRNS---SIASERFKEQEASILVDRSH 597
                  ...|:||.|      :.||      |.|.....||.   .:||..|:||::.       
  Rat   292 DFAAYLAFCGIVLHN------AQLY------ETSLLENKRNQVLLDLASLIFEEQQSL------- 337

  Fly   598 GEDLIVTPFAQILASLRSVRNNLLSLTNVPASNKSRRPNQS--SSASRSGNPPGAPLSQGEEA-- 658
              ::|:...|..:.|...|:...:.:.:....:...|..|.  ....:|..    ||::..:|  
  Rat   338 --EVILKKIAATIISFMQVQKCTIFIVDEDCPDSFSRVFQMEWEEVGKSSE----PLTREHDANK 396

  Fly   659 ----YTRLATDTIEELD-----------WCLDQLETIQTHRSVSDMASLKFK-----------RM 697
                |.:...:|:|.|:           |..:.:..|.|| .:..:.....|           ::
  Rat   397 INYMYAQYVKNTMEPLNIPDVTKDNRFPWTNENMGHISTH-CIGSLLCTPIKNGKKNKVIGVCQL 460

  Fly   698 LNK------ELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSLRVEDNP---ELVAANAAAGQQ 753
            :||      ::..|:::.....:.....|...:...|.::.....:....   |:::.:|:|.::
  Rat   461 VNKMEEKTGKIKAFNQNDEQFLEAFVIFCGLGIQNTQMYEAVERAMAKQMVTLEVLSYHASAAEE 525

  Fly   754 SAGQYARSRSPRGPPMSQISGVKRPLSHTNSFTGERLPTFGVETPRENELGTLLGELDTWGIQIF 818
            ...:           :..::....|.:.|...|.                              |
  Rat   526 ETRE-----------LQALAAAVVPSAQTLKITD------------------------------F 549

  Fly   819 SIGEFSVNRPLTCV-AYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLHAADVTQS 882
            |..:|.::...|.: ...:|....|:.:..:..:....::.:::.:|.|:..:||..||.:..|.
  Rat   550 SFSDFELSDLETALCTIRMFTDLNLVQNFQMKHEVLCRWILSVKKNYRKNVAYHNWRHAFNTAQC 614

  Fly   883 TNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAV 947
            ....|....::...|.||....|.||..||:||.|:.|.::..|...||.:| ..|.:|:||...
  Rat   615 MFAALKAGKIQNKLTDLETLALLIAALSHDLDHRGVNNSYIQRSEHPLAQLY-CHSTMEHHHFDQ 678

  Fly   948 AFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLD 1012
            ...:|.:.|..|...:..::.:|..|::...:|:||::.::....:...::...:.         
  Rat   679 CLMVLNSPGNQILSGLSIEEYKTTLKIIKQAILATDLALYIKRRGEFFELIRKNEF--------- 734

  Fly  1013 NYTDRIQ---VLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKER-ESGMDISPMCDRHN 1073
            ::.|.:|   .|..|:...|||..|||.|:.:|...|:..|||.|||:|| |..|:.:.:.:|..
  Rat   735 SFEDPLQKELFLAMLMTACDLSAITKPWPIQQRIAELVAAEFFDQGDRERKELNMEPADLMNREK 799

  Fly  1074 AT-IEKSQVGFIDYIVHPLWETWADLVH--PDAQDILDTLEENRDYYQSM 1120
            .. |...||||||.|...|:|.   |.|  .|...:||...:||..:|::
  Rat   800 KNKIPSMQVGFIDAICLQLYEA---LTHVSEDCLPLLDGCRKNRQKWQAL 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 73/247 (30%)
Pde5aXP_006233322.1 GAF 154..311 CDD:214500 33/207 (16%)
GAF 337..503 CDD:214500 24/179 (13%)
PDEase_I 602..837 CDD:278654 73/247 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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