DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnc and Pde11a

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:NP_543169.1 Gene:Pde11a / 140928 RGDID:621793 Length:935 Species:Rattus norvegicus


Alignment Length:1189 Identity:229/1189 - (19%)
Similarity:396/1189 - (33%) Gaps:383/1189 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 NGQG-------LGGSCSANGLAATGGVGGGGGSGSGGGGCGSGSGSGSGKRKSKARTKCFGGTVF 94
            :|||       |.|:.|....:|.|..|.|||:|..|   .:.|...||                
  Rat    44 SGQGASDLRPALAGASSLAQSSARGSTGIGGGAGPQG---SANSHPASG---------------- 89

  Fly    95 RCCLPCRGGGSAAPATSPPQTPAQTPDELKVIPEDCNLEKSAEQKRDLLERNNKEDDLLNRTVSG 159
                   ||.||....||........|.        ||::.|.||.            |.::.:.
  Rat    90 -------GGESAGVPLSPSWASGSRGDG--------NLQRRASQKE------------LRKSFAR 127

  Fly   160 SELDLYGGAGGGTKKHSLADTIDTSVTTPISLKTLINDVDEELDQQLSAADIAAASLASGLVARR 224
            |            |...:..|.|..||:             ...:.||:            |.||
  Rat   128 S------------KAIHVNRTYDEQVTS-------------RAQEPLSS------------VRRR 155

  Fly   225 AEPETLSDASVSPTAVVQQQQQQQQQLQQPLLQSQPHFVPSSGNILSQVTLYSGSNPSTNPCQSA 289
            |                             ||:......|::.:|||.:.               
  Rat   156 A-----------------------------LLRKASSLPPTTAHILSALL--------------- 176

  Fly   290 VQNQGQNSNPNPNQNPNTNPNQNQQRCSCQPQTSPLPHIKEEEE--------SDQANFKHQTSLK 346
                  .|..|..|.|   |.....:|          |:|:..|        .|.:|....|||.
  Rat   177 ------ESRVNLPQYP---PTAIDYKC----------HLKKHNERQFFLELVKDISNDLDLTSLS 222

  Fly   347 EHQPLPPPITIATGYCGSCESVHHSSATSSSAGTVPPGGQQTQ-----EYIAGTSSTP------S 400
            ....:...:.:....| |...|..::|           |::|.     :..|||...|      |
  Rat   223 YKILIFVCLMVDADRC-SLFLVEGAAA-----------GKKTLVSKFFDVHAGTPLLPCSTTENS 275

  Fly   401 PRIKLKFRKPHKSCWSRIVLAPIGSAGGSSSATTVIG----SNSNETLASSSTTGGTATTTQNSS 461
            ..:::.        |.:.::..:|..|.:.:......    ::..:.|....|........:||.
  Rat   276 NEVQVP--------WGKGIIGYVGEHGETVNIPDAYQDRRFNDEIDKLTGYKTKSLLCMPIRNSD 332

  Fly   462 SVSVAAHHRLTSSSASALATSHP---------------SNSQLLPTSKMQAEQGSI--------- 502
            ...:.....:......|..|...               ||:||...|:.:.|:...         
  Rat   333 GEIIGVAQAINKVPEGAPFTEDDEKVMQMYLPFCGIAISNAQLFAASRKEYERSRALLEVVNDLF 397

  Fly   503 ---GDLQKYHSRYLKNRRHTLANVRFDVENGQGARSPLEGGSPSAGLVLQNLPQRRESFLYRSDS 564
               .||:|...:.:...:..|...|..|                  |:|:::    ||.:.:...
  Rat   398 EEQTDLEKIVKKIMHRAQTLLKCERCSV------------------LLLEDI----ESPVVKFTK 440

  Fly   565 DFE-MSPKSMSRNSSIASERFKEQEASILVDRSHGED-LIVTPFAQILASLRSVRNNLLSLTNVP 627
            .|| ||||.    |:.|...|||.     |::|...| ||....|:::||           |.:|
  Rat   441 SFELMSPKC----SADAENSFKES-----VEKSSYSDWLINNSIAELVAS-----------TGLP 485

  Fly   628 --ASNKSRRPNQSSSASRSGNPPGAPLSQGEEAYTRLATDTIEELDWCLDQLETIQTHRSV---- 686
              .|:..:.|...:.|                                 ||:..... |||    
  Rat   486 VNVSDAYQDPRFDAEA---------------------------------DQISGFHI-RSVLCVP 516

  Fly   687 ---SDMASLKFKRMLNK-ELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSLRVEDNPELVAAN 747
               |:...:...::||: :...|.::.:...:.....|...::....:|                
  Rat   517 IWNSNHQIIGVAQVLNRLDGKPFDDADQRLFEAFVIFCGLGINNTIMYD---------------- 565

  Fly   748 AAAGQQSAGQYARSRSPRGPPMSQIS-GVKRPLSHTNSFTGERLPTFGVETPRENELGTLLGELD 811
                     |..:|.:.:...:..:| ......:..:.|....:|              |:.|| 
  Rat   566 ---------QVKKSWAKQSVALDVLSYHATCSKAEVDKFKAANIP--------------LVSEL- 606

  Fly   812 TWGIQIFSIGEFSVN-RPLTCVAYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLH 875
              .|......:||:: ..:...|..:|....::....|..:|...::.|:..:| :...:||..|
  Rat   607 --AIDDIHFDDFSLDVDAMITAALRMFMELGMVQKFKIDYETLCRWLLTVRKNY-RMVLYHNWRH 668

  Fly   876 AADVTQSTNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVL 940
            |.:|.|....:|.|...:.:.|.:|:...:.....||:||.|..|.|...|.|.||.:|...:.|
  Rat   669 AFNVCQLMFAMLTTAGFQEILTEVEILAVIVGCLCHDLDHRGTNNAFQAKSDSALAQLYGTSATL 733

  Fly   941 ENHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAG 1005
            |:||...|..:||::|.:||.|:..|:...|.:::...:|:||::.:.....:...:|.    .|
  Rat   734 EHHHFNHAVMILQSEGHNIFANLSSKEYSDLMQLLKQSILATDLTLYFERRTEFFELVS----KG 794

  Fly  1006 SGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISP--M 1068
            :....:.::.|..:.:  |:...||...|||..:.::...|:..|||.|||:|| |.:.::|  :
  Rat   795 AYDWSITSHRDVFRSM--LMTACDLGAVTKPWEISRQVAELVTSEFFEQGDRER-SELKLTPSAI 856

  Fly  1069 CDRHNA-TIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQ------------SM 1120
            .||:.. .:.:.|:.:||.|..||::.... |:...:.:||::..||..::            |.
  Rat   857 FDRNRKDELPRLQLEWIDSICMPLYQALVK-VNAKLKPMLDSVAANRRKWEELHQKRLQVSAASP 920

  Fly  1121 IPPSPPPSGVDENPQEDRI 1139
            :|.||.|:...    |||:
  Rat   921 VPSSPSPAVAG----EDRL 935

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 69/243 (28%)
Pde11aNP_543169.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 41..125 30/126 (24%)
GAF 217..380 CDD:214500 27/182 (15%)
GAF 402..568 CDD:214500 46/266 (17%)
PDEase_I 663..898 CDD:278654 69/242 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 915..935 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.