DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnc and PDE10A

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:NP_001372008.1 Gene:PDE10A / 10846 HGNCID:8772 Length:1055 Species:Homo sapiens


Alignment Length:1137 Identity:234/1137 - (20%)
Similarity:388/1137 - (34%) Gaps:315/1137 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GLAATGGVGGGGGSGSGGGGCG---------------SGSGSGSGKRKSKARTKCFGGTVFRCCL 98
            |.||....||||.:|.|||| |               .|.|||.|:|:........|     ..|
Human   147 GAAAAAAAGGGGDAGGGGGG-GQEAAPLSVPTSSSHRGGGGSGGGRRRLFLSPALQG-----LLL 205

  Fly    99 PCRGG-----------GSAAPATSPPQTP-------AQTPDELKVIPEDCNLEKSAEQKRDLLER 145
            |.|.|           |.||.....|..|       .|||..    |:..:...:|...  ||..
Human   206 PARAGPRPPPPPRLPLGQAARRAGSPGFPGAGPGGGGQTPRR----PQGASFALAAAAA--LLFG 264

  Fly   146 NNKEDDLLNRTVSGSELDLYGGAGGGTKKHSLADTIDTSVTTPISLKTLINDVDEELDQQLSAAD 210
            ::.||               |.:...:....|.:...:...|...:|..::...:.||:.:|.: 
Human   265 SDMED---------------GPSNNASCFRRLTECFLSPSLTDEKVKAYLSLHPQVLDEFVSES- 313

  Fly   211 IAAASLASGLVARRAEPETLSDASVSPTAVVQQQQQQQQQLQQPLLQSQPHFVPSSGNILSQVTL 275
            ::|.::...|..:..:.|..|    :|..|.:.|....|.:...|.......:.:.|:  :|:.|
Human   314 VSAETVEKWLKRKNNKSEDES----APKEVSRYQDTNMQGVVYELNSYIEQRLDTGGD--NQLLL 372

  Fly   276 YSGSN---PSTNPCQSAVQNQGQNSNPNPNQNPNTNPNQNQQRCSCQPQTSPLPHIKEEEESDQA 337
            |..|:   .:|.....|:...|:.:|               ..|...|     |.|||.:.    
Human   373 YELSSIIKIATKADGFALYFLGECNN---------------SLCIFTP-----PGIKEGKP---- 413

  Fly   338 NFKHQTSLKEHQPLPP-PITIATGYCGSCESVHHSSATSSSAGTVPPGGQQTQEYIAGTSSTPSP 401
                       :.:|. |||..|...........:.......|        .:.:..||......
Human   414 -----------RLIPAGPITQGTTVSAYVAKSRKTLLVEDILG--------DERFPRGTGLESGT 459

  Fly   402 RIKLKFRKPHKSCWSRIVLAPIGSAGGSSSATTVIG------SNSNETLASSSTTGGTATTTQNS 460
            ||:            .::..||.:|.|.     :||      ....|....|.....||    |.
Human   460 RIQ------------SVLCLPIVTAIGD-----LIGILELYRHWGKEAFCLSHQEVATA----NL 503

  Fly   461 SSVSVAAHHRLTSSSASALATSHPSNSQLLPTSKMQAEQ-GSIGDLQKYHSRYLKNRRHTLANVR 524
            :..|||.|.   ......||.....|..||..||...:. .:|..|.::...|.||..:......
Human   504 AWASVAIHQ---VQVCRGLAKQTELNDFLLDVSKTYFDNIVAIDSLLEHIMIYAKNLVNADRCAL 565

  Fly   525 FDVENGQGARSPLEGGSPSAGLVLQNLPQRRESFLYRSDSDFEMSPKSMSRNSSIASERFKEQEA 589
            |.|::                                             :|..:.|:.|     
Human   566 FQVDH---------------------------------------------KNKELYSDLF----- 580

  Fly   590 SILVDRSHGEDLIVTPFAQILASLR-SVRNNLLSLTNVPASNKSRRPNQSSSASRSGNPPGAPLS 653
                  ..||:....|..:....:| |:...:                 :...:|:|.....|.:
Human   581 ------DIGEEKEGKPVFKKTKEIRFSIEKGI-----------------AGQVARTGEVLNIPDA 622

  Fly   654 QGEEAYTRLATDTIEELDWCLDQLETIQTHRS------VSDMASLKFKRMLNK-ELSHFSESSRS 711
            ..:..:.|       |:|     |.|..|.|:      ||..:.:...:|:|| ..|.||::.  
Human   623 YADPRFNR-------EVD-----LYTGYTTRNILCMPIVSRGSVIGVVQMVNKISGSAFSKTD-- 673

  Fly   712 GNQISEYICSTFLDKQQEFDLPSLRVEDNPELVAANAAAGQQSAGQYARSRSPRGPPMSQISGVK 776
                                      |:|.::.|...|.....|..|.|.|  ....:.:::..|
Human   674 --------------------------ENNFKMFAVFCALALHCANMYHRIR--HSECIYRVTMEK 710

  Fly   777 RPLSHTNSFTGERLP-----TFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTCVAYTI 836
              ||:.:..|.|...     |..|...:|.||..            |.||.|....|...| |.:
Human   711 --LSYHSICTSEEWQGLMQFTLPVRLCKEIELFH------------FDIGPFENMWPGIFV-YMV 760

  Fly   837 FQS-----RELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLHAADVTQSTNVLL-NTPALEGV 895
            .:|     .||        :....|:.:::.:| :..|:||..||..|......:| |...|   
Human   761 HRSCGTSCFEL--------EKLCRFIMSVKKNY-RRVPYHNWKHAVTVAHCMYAILQNNHTL--- 813

  Fly   896 FTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIF 960
            ||.||..|.|.|...||:||.|.:|.:|......||.:|: .|.:|.||.:....:||.:|.:||
Human   814 FTDLERKGLLIACLCHDLDHRGFSNSYLQKFDHPLAALYS-TSTMEQHHFSQTVSILQLEGHNIF 877

  Fly   961 CNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQVLENLV 1025
            ..:...:.:.:.:::...:::||::.:......|:.|.:|      |.|.|:|.:.|.:|:..::
Human   878 STLSSSEYEQVLEIIRKAIIATDLALYFGNRKQLEEMYQT------GSLNLNNQSHRDRVIGLMM 936

  Fly  1026 HCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHNA-TIEKSQVGFIDYIVH 1089
            ...||.:.||..|:.|.....:..||:.:||:.::.|:...||.||... .:.:.|:||.:.:..
Human   937 TACDLCSVTKLWPVTKLTANDIYAEFWAEGDEMKKLGIQPIPMMDRDKKDEVPQGQLGFYNAVAI 1001

  Fly  1090 PLWETWADLVHPDAQDILDTLEENRDYYQSMI 1121
            |.:.|...:: |..:.:|....:|...::.:|
Human  1002 PCYTTLTQIL-PPTEPLLKACRDNLSQWEKVI 1032

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 67/242 (28%)
PDE10ANP_001372008.1 GAF 367..510 CDD:396252 37/208 (18%)
GAF 543..698 CDD:214500 40/267 (15%)
PDEase_I 790..1022 CDD:395177 67/242 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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