DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnc and pde7a

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_031760262.1 Gene:pde7a / 100498541 XenbaseID:XB-GENE-1013813 Length:480 Species:Xenopus tropicalis


Alignment Length:504 Identity:146/504 - (28%)
Similarity:240/504 - (47%) Gaps:57/504 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   626 VPASNKSRRP--NQSSSASRSGNPPGAPLSQGEEAYTRLATDTIEELDWCLDQLETIQTHRSVSD 688
            ||....|||.  :.|||::..|.|....|||  :...|....:.:..|         ||...:..
 Frog    16 VPKHVLSRRGAISFSSSSALFGCPNPRQLSQ--DHVKRRGAISYDSSD---------QTALYIRM 69

  Fly   689 MAS-LKFKRMLNKELSHFS----ESSRSGNQISEYICSTFLDKQQEFDLPSLRVEDNPELVAANA 748
            :.| :.||::..:::...|    ||.|.|:.  .||....|....|.:: ||...:...|:    
 Frog    70 LGSCVIFKQLSARDVRVRSRAGFESERRGSH--PYIDFRILHSHSEIEI-SLSARNIRRLL---- 127

  Fly   749 AAGQQSAGQYARSRSPRGPPMSQISGVKRPLSHTNSFTGERLPTFGVETPRENELGTLLGELDTW 813
                 |..:|.:|           |...|.::..||.       :.::.....:...:|.::.:|
 Frog   128 -----SFQRYLKS-----------SRFFRGVTAQNSL-------YILDDDYNGQAKCMLEKVGSW 169

  Fly   814 GIQIFSIGEFSVNRPLTCVAYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLHAAD 878
            ...||.....:....|..:.:.:.....|:....:.......|:..:::.|...||:||::||||
 Frog   170 SFDIFLFDRLTNGNSLVTLTFHLLSHHGLIDHFQLDMVKLRRFLVMVQEDYHSQNPYHNAVHAAD 234

  Fly   879 VTQSTNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENH 943
            |||:....|..|.|...|||.::...|.||..||:||||:...||:.::..||.:|.:.||||||
 Frog   235 VTQAMYCFLKEPKLAKSFTPWDILLGLIAAATHDLDHPGVNQSFLIKTNHYLATLYKNTSVLENH 299

  Fly   944 HLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGV 1008
            |...|..||:..|  :|.:|..::||.:...:..|:|:||:|:....|:..:|.::      .|.
 Frog   300 HWRSAVGLLRESG--LFAHMTLEERQHMEGQLGSIILATDISRQNEYLSQFRTHLD------RGD 356

  Fly  1009 LLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHN 1073
            |.|||.:||:.:|:..:.|||:.||.:...|.|:|...:.||||.|||.||:..:|:||:|||..
 Frog   357 LCLDNASDRLFILQMALKCADICNPCRTWELSKQWSEKVTEEFFYQGDVERKYKLDVSPLCDRQT 421

  Fly  1074 ATIEKSQVGFIDYIVHPLWETWADLVHPD-AQDILDTLEENRDYYQSMI 1121
            :.|...|:|||.|:|.||:..||...:.. :|.:|..:..|:..::.|:
 Frog   422 SNIANIQIGFITYLVEPLFVEWARFSNTRLSQTMLGHVGLNKASWKGML 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 95/241 (39%)
pde7aXP_031760262.1 PDEase_I 226..459 CDD:395177 95/240 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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