DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnc and pde1c

DIOPT Version :10

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_031759760.1 Gene:pde1c / 100495383 XenbaseID:XB-GENE-994226 Length:762 Species:Xenopus tropicalis


Alignment Length:569 Identity:159/569 - (27%)
Similarity:269/569 - (47%) Gaps:93/569 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   578 SIASERFKE-QEASILVD-------RSHGEDLIVTPFAQIL--ASLRSVRNNLLSLTNVPASNK- 631
            |...|.||: :.|:..:|       .:...|....|.|:..  .|..|:.|.::|..|:....| 
 Frog     5 SSRKEGFKKCRSATFSIDGFSFTIVANEAGDKNARPLARFARSKSQNSLWNTIISGLNLKEKQKP 69

  Fly   632 -----SRRPNQ--SSSASRSGNPPGAP------------LSQGEEAYTRLATDTIEELDWCLDQL 677
                 .|.|.:  :....:..:|...|            |.:||.:    ..|..:.|::....|
 Frog    70 AIATDPRSPEEILADELPQVDSPDAIPKASIRLRCLVKQLERGEAS----VVDLKKNLEYAATVL 130

  Fly   678 ETIQTHRSVSDMASLKFKRMLN--KELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSLRVEDN 740
            |::....:         :|:|:  .|||.. :|....:::.:::.|||   .::..:...|.|:.
 Frog   131 ESVYIDET---------RRLLDTEDELSDI-QSDSVPSEVRDWLASTF---TRQMGMMLKRTEEK 182

  Fly   741 PELVAANAAAGQQSAGQYARSRSPRGPPMSQISGVKRPLSHTNSFTGERLPTFGVETPRENELGT 805
            |...:...|.   .||.:                |:|....|::..|...|...:         .
 Frog   183 PRFRSIVHAV---QAGIF----------------VERMYRRTSNMVGLSYPPAVI---------A 219

  Fly   806 LLGELDTWGIQIFSIGEFSVNRPLTCVAYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVK-DNP 869
            :|..:|.|...:|::.:.|.:..|..:.|.:....:|:....||....::|:..||..|.| .||
 Frog   220 VLKNVDKWSFDVFALNDASGDHGLKFIFYELLTRYDLINRFKIPISALVSFVEALEVGYTKHKNP 284

  Fly   870 FHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMY 934
            :||.:|||||||:.:..|....|....|.||:...:|||.:||.:|.|.||.|.:.:.|:.|::|
 Frog   285 YHNLIHAADVTQTVHYFLFKSGLVHWLTELEIFAMIFAAAVHDYEHTGTTNNFHIQTRSDSAILY 349

  Fly   935 NDESVLENHHLAVAFKLLQ-NQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMV 998
            ||.|||||||::.|::||| ::..:|..|:.|...:..|.:||::||:||||.|...:..:|..:
 Frog   350 NDRSVLENHHVSAAYRLLQDDEEMNILYNLSKDDWREFRALVIEMVLATDMSCHFHQIKQMKNAL 414

  Fly   999 ETKKVAGSGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGM 1063
            :..:    |:       |:.:.|..|:|.||:|:|.|...|:.||...|:||||.|||||.|.|:
 Frog   415 QQPE----GI-------DKPKALSLLLHTADISHPAKNWDLHHRWTMSLLEEFFRQGDKEAELGL 468

  Fly  1064 DISPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEE 1112
            ..||:|||::..:.:||:||||:||.|.:....|::.   :.::..:||
 Frog   469 PFSPLCDRNSTMVAQSQIGFIDFIVEPTFTVLTDMIE---KIVVPLIEE 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDE4_UCR 603..725 CDD:465648 28/145 (19%)
PDEase_I 870..1110 CDD:459723 94/240 (39%)
pde1cXP_031759760.1 PDEase_I_N 140..200 CDD:462497 16/82 (20%)
PDEase_I 285..507 CDD:459723 94/235 (40%)

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