DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnc and XB990243

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_012822440.1 Gene:XB990243 / 100493061 XenbaseID:XB-GENE-990244 Length:521 Species:Xenopus tropicalis


Alignment Length:621 Identity:146/621 - (23%)
Similarity:259/621 - (41%) Gaps:146/621 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   563 DSDFEMSPKSMSRNSS--------IASERFKEQEASILVDRSHGEDLIVTPFAQILASLRSVRNN 619
            |.|.::.....|::||        .||.....|.|.||:|:.                       
 Frog    16 DVDGKIQKVVFSQHSSPAEIKELLCASAGLPWQAAIILLDKK----------------------- 57

  Fly   620 LLSLTNVPASNKSRRPNQSSSASRSGNPPGAPLSQGEEAYTRLATDTIEELDWC----------L 674
                ..|.|::.:...|..|||.|..:...:|..:.|:.:..:.:...||....          :
 Frog    58 ----GTVVATDSTIPKNSKSSAYRIVSRSISPRPEKEDFFQNILSQVTEEFSRAFRVTEMKREVM 118

  Fly   675 DQLETIQTHRSVSDMASLKFKRMLNKELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSLRVED 739
            ::|..::....|..:.::...:..| ||.:..:............|..:..:    |:..|    
 Frog   119 ERLAMLERRMEVEGLKAIDIDKCKN-ELKNLRDEMEKKTSRLSCPCRFYYSE----DIKKL---- 174

  Fly   740 NPELVAANAAAGQQSAGQYARSRSPRGPPMSQISGVKRPLSHTNSFTGERLPTFGVETPRENELG 804
            ||                  |...|..|        |..|| :.:....:.|||           
 Frog   175 NP------------------RRDVPTYP--------KYTLS-SETIDALKKPTF----------- 201

  Fly   805 TLLGELDTWGIQIFSIGEFSVNRPLTCVAYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVKDNP 869
                  |.|        .:..|..|:|:.: ::....|:....:.|.|...::..::::| :.||
 Frog   202 ------DVW--------HWEYNEMLSCLEF-MYHDLGLVREFNMNPITLKRWLLCIQENY-RTNP 250

  Fly   870 FHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMY 934
            |||..|...|||....:::...|:...:.:|:|..:.:|..||:||||..|.:.:|:.:|||:.|
 Frog   251 FHNFRHCFCVTQMMYGMIHLCNLQEKMSLIELGVLMTSAVCHDLDHPGYNNTYQINAHTELAIRY 315

  Fly   935 NDESVLENHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVE 999
            ||.|.|||||.||||::|.....:||.|:..:..:.:|:.:|.::|:|||::|..:|...|.   
 Frog   316 NDMSPLENHHCAVAFQILAQPENNIFANITPELFKQIRQSIIRLILATDMARHGEILESFKK--- 377

  Fly  1000 TKKVAGSGVLLLDNY----TDRIQVLEN-LVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKER 1059
                      :|.|:    .|.::.|:. |:.|.|:||..:|..:.:.||..|:||:|:|.|:|:
 Frog   378 ----------VLPNFDFSNEDHVKTLQMVLIKCCDISNEVRPTKVAEPWVDCLLEEYFMQSDREK 432

  Fly  1060 ESGMDISPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILD-TLEENRDYYQSMIPP 1123
            ..|:.::|..||...|..|:|:|||.:::.|::|:...| .|..::::. .|.|.||:|      
 Frog   433 SEGLPVTPFMDRDKVTKPKAQIGFIKFVLIPMFESVMKL-FPHIEEVMVLPLREARDHY------ 490

  Fly  1124 SPPPSGVDENPQEDRIRFQVTLEESDQENLAELEEG 1159
                        |:.:..:..|.|..|:..|.|..|
 Frog   491 ------------EELMEIEEALAEVQQKKSATLSIG 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 81/246 (33%)
XB990243XP_012822440.1 GvpK <110..>153 CDD:282916 5/43 (12%)
PDEase_I 251..479 CDD:278654 81/241 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2223
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.950

Return to query results.
Submit another query.