DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnc and pde4a

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_031755243.1 Gene:pde4a / 100488846 XenbaseID:XB-GENE-5789473 Length:744 Species:Xenopus tropicalis


Alignment Length:706 Identity:415/706 - (58%)
Similarity:496/706 - (70%) Gaps:68/706 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 HHRLTSSSASALATS-HPSNSQLLPTSKMQAEQGSIGDLQKYHSRYLKNRRHTLANVRFDVENGQ 531
            |.......|.|:.|| .|.    |..|:|.......|.....|:.:.:         |||||||.
 Frog    53 HPHRQMERADAMDTSDRPG----LRKSRMSWPSSFHGTTSNSHASHKQ---------RFDVENGP 104

  Fly   532 G-ARSPLEGGSPSAGLVLQ-NLP--QRRESFLYRSDSDFEMSPKSMSRNSSIASERFKEQEASIL 592
            . .|||:: ...|.||||. :.|  |||||||||||||::||||:||||||:.||          
 Frog   105 SPGRSPID-SQASPGLVLHPSFPQSQRRESFLYRSDSDYDMSPKTMSRNSSVTSE---------- 158

  Fly   593 VDRSHGEDLIVTPFAQILASLRSVRNNLLSLTNVPASNKSRRPNQSSSASRSGNPPGAPLSQGEE 657
               :|.||||||||||:||||||||||...|.||......|.|.........     |.||  ||
 Frog   159 ---AHAEDLIVTPFAQVLASLRSVRNNFTILANVTTPTNKRSPVMPQQTVCK-----ATLS--EE 213

  Fly   658 AYTRLATDTIEELDWCLDQLETIQTHRSVSDMASLKFKRMLNKELSHFSESSRSGNQISEYICST 722
            .|.:||.:|:||||||||||||:||:||||:|||.|||||||:||:|.||.||||||:||||.:|
 Frog   214 TYQQLAKETLEELDWCLDQLETMQTYRSVSEMASNKFKRMLNRELTHLSEMSRSGNQVSEYISNT 278

  Fly   723 FLDKQQEFDLPSLRVEDNPELVAANAAAGQQSAGQYARSRSPRGPPMSQISGVKRPLSHTNSFTG 787
            |||||.|.|:|                    |..|..|.:..:..||.||||||: |.|::|.|.
 Frog   279 FLDKQNEVDIP--------------------SPTQKEREKKKKQQPMCQISGVKK-LMHSSSLTN 322

  Fly   788 ERLPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTCVAYTIFQSRELLTSLMIPPKT 852
            ..:|.|||:|.:|..||..|..|:.||:.||.:.|:|.||||:|..||:||.||||.:..||..|
 Frog   323 SAIPRFGVKTDQEESLGKELDNLNKWGLNIFRVAEYSNNRPLSCTMYTVFQERELLKTFKIPVDT 387

  Fly   853 FLNFMSTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPG 917
            .:.:|.||||||..|..:|||||||||||||:|||:||||:.|||.||:..|||||.||||||||
 Frog   388 LMTYMMTLEDHYHADVAYHNSLHAADVTQSTHVLLSTPALDAVFTDLEILAALFAAAIHDVDHPG 452

  Fly   918 LTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLST 982
            ::||||:|::||||||||||||||||||||.|||||.:.||||.|:.|:||||:||||||:||:|
 Frog   453 VSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEENCDIFQNLTKRQRQTMRKMVIDMVLAT 517

  Fly   983 DMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALL 1047
            |||||||||||||||||||||..||||||||||||||||.|:|||||||||||||.||::|...:
 Frog   518 DMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKPLELYRQWTDRI 582

  Fly  1048 MEEFFLQGDKERESGMDISPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEE 1112
            :||||.|||||||.||:||||||:|.|::|||||||||||||||||||||||||||||||||||:
 Frog   583 LEEFFRQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLED 647

  Fly  1113 NRDYYQSMIP--PSPPPSGVDENPQE--DRIRFQVTLEE----SDQENLAELEEGD 1160
            |||:||.|||  |||||...|::.:.  ::.:|::||||    ||::..:.:||.|
 Frog   648 NRDWYQGMIPQSPSPPPDDPDKDEEACIEKFQFELTLEEEAEDSDKDRNSGIEEED 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 195/240 (81%)
pde4aXP_031755243.1 PDE4_UCR 166..281 CDD:407935 75/121 (62%)
PDEase_I 405..646 CDD:395177 195/240 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 414 1.000 Domainoid score I665
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 763 1.000 Inparanoid score I546
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 1 1.000 - - FOG0000302
OrthoInspector 1 1.000 - - otm47870
Panther 1 1.100 - - O PTHR11347
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X171
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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