DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnc and pde11a

DIOPT Version :10

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_002934646.1 Gene:pde11a / 100379882 XenbaseID:XB-GENE-5999893 Length:892 Species:Xenopus tropicalis


Alignment Length:1051 Identity:201/1051 - (19%)
Similarity:355/1051 - (33%) Gaps:328/1051 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 PETLSDASVSPTAVVQQQQQQQQQLQQPLLQSQPHFVPSSGNILSQVTLYSGSNPSTNPCQSAVQ 291
            ||...|..:        ::.:.|.:::.:.::|....|||          |.::..:..|.|   
 Frog    19 PELFEDYLI--------RKGKHQMVERWMKRNQLAKTPSS----------SSADDKSKDCWS--- 62

  Fly   292 NQGQNSNPNPNQNP-----------NTNPNQNQQRCSCQPQTSPLPHIKEEEESDQANFKHQTSL 345
            |:|.......:|..           |.|...::             |:....:....:.:.:..|
 Frog    63 NRGDGLQRRASQKELRKSFARSKAINVNRTYDE-------------HVNSRAQEPLTSMRRRALL 114

  Fly   346 KEHQPLPPPITIATGYCGSCESVHHSSATSSSAGTVPPGGQQTQEYIAGTSSTPSPRIK-LKFRK 409
            ::...|||            .:.|..||...|...:|       :|       ||..|. :.:.|
 Frog   115 RKASSLPP------------TTAHILSALLESRVNIP-------QY-------PSTAIDYIYYLK 153

  Fly   410 PHKS--------------------CWSRIVLAPIGSAGGSSSATTVIGSNSNETLAS------SS 448
            .|..                    |:..::...|.......|...|.|:.:.::|.|      :.
 Frog   154 EHNERAFFLELVKDISNELNLTSLCYKILIFVCIMVDADRCSLFLVEGTANKKSLVSKFFDVHAG 218

  Fly   449 TTGGTATTTQNSSSVSVAAHHRLTSSSASALATSHPSNSQLLPTSKMQAEQGSIGDLQKYHSRYL 513
            ||...:.:|:||:.|.|                  |....::.......|..:|.|  .|..|..
 Frog   219 TTLLPSCSTENSNEVQV------------------PWGKGIIGYVAEHGETVNIPD--AYQDRRF 263

  Fly   514 KNRRHTLANVRFDVENGQGARSPLEGGSPSAGLVLQNLPQRRESFLYRSDSDFEMSPKSMSRNSS 578
            .:        ..|...|...:|            |..:|.|        .||.|:...:.:.|.:
 Frog   264 SD--------EIDKLTGYKTKS------------LLCMPIR--------SSDGEIIGVAQAINKT 300

  Fly   579 IASERFKEQEASILVDRSHGEDLIVTPFAQILASLRSVRNNLLSLTNVPASNKSRRPNQSSSASR 643
            .....|.|.:..::        .:..||..|            :::|......||:....|    
 Frog   301 PGGAPFIEDDEKVM--------QMYLPFCGI------------AISNAQLFAASRKEYDRS---- 341

  Fly   644 SGNPPGAPLSQGEEAYTRLATDTIEELDWCLDQLETIQTHRS-------------VSDMAS--LK 693
                         .|...:..|..|| ...|:::.....||:             :.|:.|  :|
 Frog   342 -------------RALLEVVNDLFEE-QTDLEKVVKKIMHRAQNLLKCERCSVLLLEDIESPVVK 392

  Fly   694 FKR---MLNKELSHFSESSRS-------------GNQISEYICSTFL-----DKQQEFDLPSLRV 737
            |.:   :|:.:.|..:|:|..             .|.|:|.:.||.|     |..|:   |...|
 Frog   393 FTKSFELLSPKCSADTENSFKDSVEKSSYSDWLVNNSIAELVASTGLPVNISDAYQD---PRFDV 454

  Fly   738 EDNPELVAANAAAGQQSAGQYARS--RSPRGPPMSQISGVKRPLSHTNS---------------- 784
            |            ..|.:|.:.||  ..|......||.||.:.|:..:.                
 Frog   455 E------------ADQFSGFHIRSVLCVPIWNSSHQIIGVAQVLNRIDGKPFDDADQRLFEAFVI 507

  Fly   785 FTGERLPTFGVETPRENELGTLLGE--LDTWGIQIFSIGEFS---------------VNRPLT-- 830
            |.|     .|:.       .|::.:  ..:|..|..::...|               .|.||.  
 Frog   508 FCG-----LGIN-------NTIMYDQVKKSWAKQSVALDVLSYHATCSKAEVDKFKAANIPLVSE 560

  Fly   831 -----------CV--------AYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLHA 876
                       |:        |..:|....::....|..:|...::.|:..:| :...:||..||
 Frog   561 LSIADIHFDDFCLDVDAMISAALRMFMELGMVQKFKIDYETLCRWLLTIRKNY-RMVLYHNWRHA 624

  Fly   877 ADVTQSTNVLLNTPALEGVFTPLEVGGALFAACI-HDVDHPGLTNQFLVNSSSELALMYNDESVL 940
            .:|.|....:|.|...:.|.:..|. .||...|: ||:||.|..|.|...|.|.|:.:|...:.|
 Frog   625 FNVCQLMFAMLTTAGFQEVLSDTET-LALIVGCLCHDLDHRGTNNAFQAKSGSALSQLYGTSATL 688

  Fly   941 ENHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAG 1005
            |:||...|..:||::|.:||.|:..::...|.:::...:|:||::.|      .:...|..::..
 Frog   689 EHHHFNHAVMILQSEGHNIFANLSSQEYSDLMQLLKQSILATDITLH------FERRNEFFELVN 747

  Fly  1006 SGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKER-ESGMDISPMC 1069
            .|....:..:.|:.....|:...||...|||..:.::...|:..|||.|||:|| |..|..|.:.
 Frog   748 KGDYNWNVKSHRVIFRSMLMTACDLGAATKPWEISRQVAELVTSEFFEQGDRERLELKMTPSAIF 812

  Fly  1070 DRHNA-TIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSM------------- 1120
            ||:.. .:.:.|:.:||.|..||:|:... ::...:.:||::..||..::.:             
 Frog   813 DRNRKDELPRLQLEWIDNICFPLYESLVK-INGKLKPMLDSVTTNRGKWEELHRKQGNSSSTSYP 876

  Fly  1121 IPPSPPPSGVD 1131
            .|.|.|...::
 Frog   877 TPASSPQPAIE 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDE4_UCR 603..725 CDD:465648 28/157 (18%)
PDEase_I 870..1110 CDD:459723 72/242 (30%)
pde11aXP_002934646.1 GAF 173..335 CDD:214500 36/229 (16%)
GAF 357..523 CDD:214500 36/192 (19%)
PDEase_I 618..853 CDD:459723 72/242 (30%)

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