DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnc and pde11a

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_002934646.1 Gene:pde11a / 100379882 XenbaseID:XB-GENE-5999893 Length:892 Species:Xenopus tropicalis


Alignment Length:1051 Identity:201/1051 - (19%)
Similarity:355/1051 - (33%) Gaps:328/1051 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 PETLSDASVSPTAVVQQQQQQQQQLQQPLLQSQPHFVPSSGNILSQVTLYSGSNPSTNPCQSAVQ 291
            ||...|..:        ::.:.|.:::.:.::|....|||          |.::..:..|.|   
 Frog    19 PELFEDYLI--------RKGKHQMVERWMKRNQLAKTPSS----------SSADDKSKDCWS--- 62

  Fly   292 NQGQNSNPNPNQNP-----------NTNPNQNQQRCSCQPQTSPLPHIKEEEESDQANFKHQTSL 345
            |:|.......:|..           |.|...::             |:....:....:.:.:..|
 Frog    63 NRGDGLQRRASQKELRKSFARSKAINVNRTYDE-------------HVNSRAQEPLTSMRRRALL 114

  Fly   346 KEHQPLPPPITIATGYCGSCESVHHSSATSSSAGTVPPGGQQTQEYIAGTSSTPSPRIK-LKFRK 409
            ::...|||            .:.|..||...|...:|       :|       ||..|. :.:.|
 Frog   115 RKASSLPP------------TTAHILSALLESRVNIP-------QY-------PSTAIDYIYYLK 153

  Fly   410 PHKS--------------------CWSRIVLAPIGSAGGSSSATTVIGSNSNETLAS------SS 448
            .|..                    |:..::...|.......|...|.|:.:.::|.|      :.
 Frog   154 EHNERAFFLELVKDISNELNLTSLCYKILIFVCIMVDADRCSLFLVEGTANKKSLVSKFFDVHAG 218

  Fly   449 TTGGTATTTQNSSSVSVAAHHRLTSSSASALATSHPSNSQLLPTSKMQAEQGSIGDLQKYHSRYL 513
            ||...:.:|:||:.|.|                  |....::.......|..:|.|  .|..|..
 Frog   219 TTLLPSCSTENSNEVQV------------------PWGKGIIGYVAEHGETVNIPD--AYQDRRF 263

  Fly   514 KNRRHTLANVRFDVENGQGARSPLEGGSPSAGLVLQNLPQRRESFLYRSDSDFEMSPKSMSRNSS 578
            .:        ..|...|...:|            |..:|.|        .||.|:...:.:.|.:
 Frog   264 SD--------EIDKLTGYKTKS------------LLCMPIR--------SSDGEIIGVAQAINKT 300

  Fly   579 IASERFKEQEASILVDRSHGEDLIVTPFAQILASLRSVRNNLLSLTNVPASNKSRRPNQSSSASR 643
            .....|.|.:..::        .:..||..|            :::|......||:....|    
 Frog   301 PGGAPFIEDDEKVM--------QMYLPFCGI------------AISNAQLFAASRKEYDRS---- 341

  Fly   644 SGNPPGAPLSQGEEAYTRLATDTIEELDWCLDQLETIQTHRS-------------VSDMAS--LK 693
                         .|...:..|..|| ...|:::.....||:             :.|:.|  :|
 Frog   342 -------------RALLEVVNDLFEE-QTDLEKVVKKIMHRAQNLLKCERCSVLLLEDIESPVVK 392

  Fly   694 FKR---MLNKELSHFSESSRS-------------GNQISEYICSTFL-----DKQQEFDLPSLRV 737
            |.:   :|:.:.|..:|:|..             .|.|:|.:.||.|     |..|:   |...|
 Frog   393 FTKSFELLSPKCSADTENSFKDSVEKSSYSDWLVNNSIAELVASTGLPVNISDAYQD---PRFDV 454

  Fly   738 EDNPELVAANAAAGQQSAGQYARS--RSPRGPPMSQISGVKRPLSHTNS---------------- 784
            |            ..|.:|.:.||  ..|......||.||.:.|:..:.                
 Frog   455 E------------ADQFSGFHIRSVLCVPIWNSSHQIIGVAQVLNRIDGKPFDDADQRLFEAFVI 507

  Fly   785 FTGERLPTFGVETPRENELGTLLGE--LDTWGIQIFSIGEFS---------------VNRPLT-- 830
            |.|     .|:.       .|::.:  ..:|..|..::...|               .|.||.  
 Frog   508 FCG-----LGIN-------NTIMYDQVKKSWAKQSVALDVLSYHATCSKAEVDKFKAANIPLVSE 560

  Fly   831 -----------CV--------AYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLHA 876
                       |:        |..:|....::....|..:|...::.|:..:| :...:||..||
 Frog   561 LSIADIHFDDFCLDVDAMISAALRMFMELGMVQKFKIDYETLCRWLLTIRKNY-RMVLYHNWRHA 624

  Fly   877 ADVTQSTNVLLNTPALEGVFTPLEVGGALFAACI-HDVDHPGLTNQFLVNSSSELALMYNDESVL 940
            .:|.|....:|.|...:.|.:..|. .||...|: ||:||.|..|.|...|.|.|:.:|...:.|
 Frog   625 FNVCQLMFAMLTTAGFQEVLSDTET-LALIVGCLCHDLDHRGTNNAFQAKSGSALSQLYGTSATL 688

  Fly   941 ENHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAG 1005
            |:||...|..:||::|.:||.|:..::...|.:::...:|:||::.|      .:...|..::..
 Frog   689 EHHHFNHAVMILQSEGHNIFANLSSQEYSDLMQLLKQSILATDITLH------FERRNEFFELVN 747

  Fly  1006 SGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKER-ESGMDISPMC 1069
            .|....:..:.|:.....|:...||...|||..:.::...|:..|||.|||:|| |..|..|.:.
 Frog   748 KGDYNWNVKSHRVIFRSMLMTACDLGAATKPWEISRQVAELVTSEFFEQGDRERLELKMTPSAIF 812

  Fly  1070 DRHNA-TIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSM------------- 1120
            ||:.. .:.:.|:.:||.|..||:|:... ::...:.:||::..||..::.:             
 Frog   813 DRNRKDELPRLQLEWIDNICFPLYESLVK-INGKLKPMLDSVTTNRGKWEELHRKQGNSSSTSYP 876

  Fly  1121 IPPSPPPSGVD 1131
            .|.|.|...::
 Frog   877 TPASSPQPAIE 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 72/243 (30%)
pde11aXP_002934646.1 GAF 173..335 CDD:214500 36/229 (16%)
GAF 357..523 CDD:214500 36/192 (19%)
PDEase_I 618..853 CDD:365964 72/242 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.