DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnc and pde1a

DIOPT Version :10

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:NP_001096444.1 Gene:pde1a / 100125056 XenbaseID:XB-GENE-949176 Length:538 Species:Xenopus tropicalis


Alignment Length:581 Identity:176/581 - (30%)
Similarity:277/581 - (47%) Gaps:88/581 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   627 PASNKSRRPNQSSSASRSGNPPGAPLSQGEEAYTRLATDTIEELDWCLDQLETIQTHRSVSDMAS 691
            |:||...|.:......|........:.|.|:....: ||....:::....||.:....:      
 Frog    14 PSSNFETRESNDKMVQRLQGILRCLVKQLEKGDINV-TDLKNNIEYAASVLEAVYIDET------ 71

  Fly   692 LKFKRMLN--KELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSLRVEDNPEL--VAANAAAGQ 752
               :|:|:  .|||.....| ...::.:::.|||..|   ..:...|.|:.|:.  :.....||.
 Frog    72 ---RRLLDTEDELSDIHTDS-VPLEVRDWLASTFTRK---MGMRKRRPEEKPKFRSIVHAVQAGI 129

  Fly   753 QSAGQYARSRSPRGPPMSQISGVKRPLSHTNSFTGERLPTFGVETPRENELGTLLGELDTWGIQI 817
            .....|.||        |.|:|:..|.|...|                      :.::|.|...:
 Frog   130 FVERMYRRS--------SNIAGLTYPSSVIAS----------------------MKDVDRWAFNV 164

  Fly   818 FSIGEFSVNRPLTCVAYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVK-DNPFHNSLHAADVTQ 881
            |::.|.|....|..:.|.:|...:|.....||....::|:..||..|.| .||:||.:|||||||
 Frog   165 FTLNEASGEHALKFMVYELFTRYDLTNRFKIPVSNLVSFVEALEVGYSKYKNPYHNLVHAADVTQ 229

  Fly   882 STN-VLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHL 945
            :.: ::|:|..:..: |.||:...:|||.|||.:|.|.||.|.:.:.|::|::|||.|||||||:
 Frog   230 TVHYIILHTGIMHWL-TELEILAMIFAAAIHDFEHTGTTNNFHIQTRSDVAILYNDRSVLENHHV 293

  Fly   946 AVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLL 1010
            :.|::::|:...:||.|:.|...:.||.:||::|||||||.|..   .||||..|.: ...|:  
 Frog   294 SAAYRIMQDDEMNIFINLSKDDWRDLRTLVIEMVLSTDMSGHFQ---QLKTMRSTLQ-QPEGI-- 352

  Fly  1011 LDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHNAT 1075
                 |:.:.:..::|.||:|:|.||..::.||..|||||||.|||||...|:..||:|||.:..
 Frog   353 -----DKAKAMSLILHAADISHPAKPWDMHLRWTNLLMEEFFRQGDKEAALGLPFSPLCDRKSTM 412

  Fly  1076 IEKSQVGFIDYIVHPLWETWAD----LVHPDAQD-------ILD-TLEENRDYYQSMIPPSPP-- 1126
            :.:||:||||:||.|.:....|    :|.|..::       :.| :.:.|.:..:....|..|  
 Frog   413 VAQSQIGFIDFIVEPTFTLLTDSTEKIVFPLIEEAAKSDNSVFDKSSQNNSEVVRGTDTPRKPSV 477

  Fly  1127 -PSGVD-ENPQE------DRIRFQVTLEESDQENLAELEE--GDESGGEST--TTGTTGTT 1175
             .|.:| .:|.|      |...|:..|.|..|:|....:|  ..|...:||  :.|.||.|
 Frog   478 RTSQMDGSSPSEYSLATVDLHHFKKNLVEIIQQNKERWKELAAQERNLKSTHKSEGGTGGT 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDE4_UCR 603..725 CDD:465648 20/99 (20%)
PDEase_I 870..1110 CDD:459723 102/252 (40%)
pde1aNP_001096444.1 PDEase_I_N 73..133 CDD:462497 15/63 (24%)
PDEase_I 218..443 CDD:459723 100/236 (42%)

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