DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnc and pde7b

DIOPT Version :9

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_012817988.1 Gene:pde7b / 100037872 XenbaseID:XB-GENE-867509 Length:499 Species:Xenopus tropicalis


Alignment Length:528 Identity:146/528 - (27%)
Similarity:236/528 - (44%) Gaps:79/528 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   670 LDWCLDQLETIQTHRSVS-----DMASLKFKRMLNKELSHFSESSRSGN---QISEYICSTFLDK 726
            ||.|.:..|..::.|:..     .|.||              .:..|||   ::.|.|....|..
 Frog     4 LDRCFNSAEMGRSWRTAEVLLPPSMGSL--------------PAYHSGNLTCELPEIIKMVKLLW 54

  Fly   727 QQEFDLPSLRVEDNPELVAANAAAGQQSAGQYARSRSPRGPPMSQISG----------------- 774
            :.:..|.|::...   |:|...|.|  |....||.:.|.| .:|:..|                 
 Frog    55 KSKTGLQSVKQRG---LLANEDALG--SLPGDARVKGPAG-VLSERRGSYPFIDFRLLNNTTHSG 113

  Fly   775 -------VKRPLSHTNSFTGERL-----PTFGVETPRENELGT---LLGELDTWGIQIFSIGEFS 824
                   |||.||....|...||     |...:....|:.||.   :|.::..|...||.....:
 Frog   114 EIGTKKKVKRLLSFQRYFHASRLLRGIVPQASLHLLDEDYLGQARHMLSKVGMWNFDIFLFDRLT 178

  Fly   825 VNRPLTCVAYTIFQSRELLTSLMIPPKTFLNFMSTLEDHYVKDNPFHNSLHAADVTQSTNVLLNT 889
            ....|..:...:|....|:....:.......|:..:::.|...||:||::|||||||:.:..|..
 Frog   179 NGNSLVTLLCHLFNVHGLIHHFQLDMVKLHRFLVMVQEDYHSQNPYHNAVHAADVTQAMHCYLKE 243

  Fly   890 PALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQN 954
            |.|....|||::...|.||..|||||||:...||:.:...||.:|.:.|||||||......:|:.
 Frog   244 PKLASFLTPLDIMLGLLAAAAHDVDHPGVNQPFLIKTKHHLASLYQNTSVLENHHWRSTVGMLRE 308

  Fly   955 QGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQ 1019
            .  .:..::.|:..|.:.:.:..::||||:::....|:.||..:..|.      |.|::...|..
 Frog   309 S--RLLAHLPKEMTQDIEQQLGSLILSTDINRQNEFLSRLKDHLNNKD------LCLEDTEHRHF 365

  Fly  1020 VLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHNATIEKSQVGFI 1084
            :|:..:.|||:.||.:...|.|:|...:.|||:.||:.||:.|:||||:|::...|:...|||||
 Frog   366 MLQIALKCADICNPCRVWELSKQWSERVCEEFYRQGELERKLGLDISPLCNQQKDTVPSIQVGFI 430

  Fly  1085 DYIVHPLWETWADLV--HPDAQDILDTLEENRDYYQSMIPPSPPPSGVDENPQEDRIRFQVTLEE 1147
            .||..||:..|....  .|.:.::|:.|.:|:..:::::..       ..:...||:. |.| |:
 Frog   431 TYIAEPLFVEWGHFTGDTPLSVNMLNHLRKNKSKWRALLHK-------QRSKSNDRLG-QGT-ED 486

  Fly  1148 SDQENLAE 1155
            .|.:.|.|
 Frog   487 KDDKKLTE 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 86/242 (36%)
pde7bXP_012817988.1 PDEase_I 224..459 CDD:365964 86/242 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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