DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnc and pde1b

DIOPT Version :10

Sequence 1:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster
Sequence 2:XP_017946519.1 Gene:pde1b / 100036722 XenbaseID:XB-GENE-987197 Length:554 Species:Xenopus tropicalis


Alignment Length:539 Identity:154/539 - (28%)
Similarity:252/539 - (46%) Gaps:83/539 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   670 LDWCLDQLET-----IQTHRSVSDMASL-------KFKRML--NKELSHFSESSRSGNQISEYIC 720
            |.:.:.|||.     ::..:::...|||       :.:::|  :.||... .|....:::.:::.
 Frog    57 LKYMVKQLENGEVNIVELKKNLEYTASLLEAVYIDETRQILDTDDELPEM-RSDSVPSEVRDWLA 120

  Fly   721 STFLDKQQEFDLPSLRVEDNPEL--VAANAAAGQQSAGQYARSRSPRGPPMSQISGVKRPLSHTN 783
            |||   .|:......|.|:.|..  :.....||......:.||.:..||..|  :.|...|.|  
 Frog   121 STF---TQQTRSTGRRSEEKPRFRSIVHAVQAGIFVERMFRRSYTAVGPNYS--AAVVNSLKH-- 178

  Fly   784 SFTGERLPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTCVAYTIFQSRELLTSLMI 848
                                      ||.|...:|.:...|.:..|..:.:.:.....|.:...|
 Frog   179 --------------------------LDLWDFDVFVLNRVSEDHALKTIVFELLSRHNLNSRFKI 217

  Fly   849 PPKTFLNFMSTLEDHYVK-DNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGALFAACIHD 912
            |....::|:.:||..|.| .||:||.:|||||||:.:..|....:......:|:...:|||.|||
 Frog   218 PVAFLMSFLDSLESGYGKYKNPYHNQIHAADVTQTVHCFLLRTGMVHCLNEIEILAIIFAAAIHD 282

  Fly   913 VDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVID 977
            .:|.|.||.|.:.:.|:.|::|||.|||||||::..::::|:...:||.|:.|.:...||.:||:
 Frog   283 FEHTGTTNSFHIQTKSDCAILYNDRSVLENHHVSAVYRIMQDDEMNIFVNLTKDEFTELRSLVIE 347

  Fly   978 IVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKR 1042
            :||:||||.|...:..:||.::..:.           .|:.:.|..|:|.||:|:|||...::.|
 Frog   348 MVLATDMSCHFQQVKTMKTSLQQLET-----------IDKSKALSLLLHAADISHPTKQWKVHAR 401

  Fly  1043 WVALLMEEFFLQGDKERESGMDISPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDIL 1107
            |...||||||.|||||.|.|:..||:|||.:..:.:||:|||::||.|.:....|:    |:..:
 Frog   402 WTKALMEEFFRQGDKEAEMGLPFSPLCDRKSTLVAQSQIGFIEFIVDPTFSVLTDV----AEKTV 462

  Fly  1108 DTLEENRDYYQSMIPPSPPPS-----GVDENPQEDRIR-----FQVTLEESDQENLAELEEGDES 1162
            ..|.|.|...:|....:...|     .:|::.:...|.     |:.|..:..|||       .:.
 Frog   463 LPLVEERSKSKSTASVNQSSSQWRQPSIDDHSEMGDINADIKSFRTTWTKYIQEN-------KQK 520

  Fly  1163 GGESTTTGTTGTTAASALS 1181
            ..|...:|.|..|:...||
 Frog   521 WKERAASGITNQTSVDELS 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dncNP_726846.1 PDE4_UCR 603..725 CDD:465648 14/68 (21%)
PDEase_I 870..1110 CDD:459723 92/239 (38%)
pde1bXP_017946519.1 PDEase_I_N 95..155 CDD:462497 13/63 (21%)
PDEase_I 240..467 CDD:459723 93/241 (39%)

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