DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10793 and RPT6

DIOPT Version :10

Sequence 1:NP_570054.2 Gene:CG10793 / 31308 FlyBaseID:FBgn0288967 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_011467.1 Gene:RPT6 / 852834 SGDID:S000003016 Length:405 Species:Saccharomyces cerevisiae


Alignment Length:344 Identity:98/344 - (28%)
Similarity:174/344 - (50%) Gaps:31/344 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 VGAATQALSNE------QPLQIKKMETATESNGQDNACEIEHVHLGGDDVLFSSLEWQSLAELVK 193
            ||...:.:|::      ||.....::.|.:.|.:|.... :.|.|..|..:...:.......||.
Yeast    72 VGEVIKIVSDKKVLVKVQPEGKYIVDVAKDINVKDLKAS-QRVCLRSDSYMLHKVLENKADPLVS 135

  Fly   194 TSILQENIKIKWSDVCGNQRAIELIKEAVLTPIEFPQLF-AHGLKPWRSLLLHGPPGSGKTLLAK 257
            ..::::.....:..|.|..:.|:.|||.:..|::.|:|| :.|:...:.::|:||||:||||||:
Yeast   136 LMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLAR 200

  Fly   258 ALYSETQGQVTFFNITASIMVSKWRGESEKILRVLFHMAAKRAPSVIFFDEIESLTSKRDRATDH 322
            |:...|  ...|..::.:.:|.|:.||..:::|.||.||.:.|||:||.|||:|:.|.|...:..
Yeast   201 AVAHHT--DCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGG 263

  Fly   323 ESS--KRFKNELLQLLDGMEHSLNGVFVLASTNLPWDI-DEAFLR--RFEKKLLVQLPNAAERSC 382
            ..|  :|...|||..|||.|.|.|...::|:..|  || |.|.||  |.::|:....|:.|.|:.
Yeast   264 GDSEVQRTMLELLNQLDGFETSKNIKIIMATNRL--DILDPALLRPGRIDRKIEFPPPSVAARAE 326

  Fly   383 LI---NRLLGSSISLNPRLLEQLVEISDHFTGDEIRLACKEISMH-----RVRCATKIGDRSIG- 438
            ::   :|.:..:..:|   |.::.|..:..:|.:::..|.|..|:     |:....:..:.::| 
Yeast   327 ILRIHSRKMNLTRGIN---LRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGK 388

  Fly   439 LLAKESPAAIEANVEKAFR 457
            ::.|....||  :|.|.|:
Yeast   389 VMNKNQETAI--SVAKLFK 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10793NP_570054.2 LisH 31..55 CDD:462501
RecA-like_VPS4-like 208..372 CDD:410917 66/169 (39%)
RPT6NP_011467.1 PRK03992 12..399 CDD:179699 95/336 (28%)
Blue background indicates that the domain is not in the aligned region.

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