DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10793 and RPT1A

DIOPT Version :10

Sequence 1:NP_570054.2 Gene:CG10793 / 31308 FlyBaseID:FBgn0288967 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_175778.1 Gene:RPT1A / 841812 AraportID:AT1G53750 Length:426 Species:Arabidopsis thaliana


Alignment Length:387 Identity:108/387 - (27%)
Similarity:174/387 - (44%) Gaps:64/387 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 GKYPKILKKVGAKIKVEMGGGKAHEKTPAKELPKK------PPTTDASLA---NWHIGVGAATQA 141
            |.|...:|||..:|               |:|.||      ...:|..||   .|.:  .:..|.
plant    32 GPYSAPIKKVEKEI---------------KDLAKKINDLCGIKESDTGLAPPSQWDL--VSDKQM 79

  Fly   142 LSNEQPLQIKKMETATESNGQD-----NACEIEHVHLG-GDDVLFSSLE-----------WQSLA 189
            :..|||||:.:.......|.:|     |..:|....:| ||.|..:.:|           :|...
plant    80 MQEEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144

  Fly   190 EL-------VKTSILQENIKIKWSDVCGNQRAIELIKEAVLTPIEFPQLFAH-GLKPWRSLLLHG 246
            .|       |....::|...:.::||.|.:..||.::|.|..|:..|:.|.. |:.|.:.:|.:|
plant   145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 209

  Fly   247 PPGSGKTLLAKALYSETQGQVTFFNITASIMVSKWRGESEKILRVLFHMAAKRAPSVIFFDEIES 311
            |||:||||||:|:.:.|  ...|..:..|.:|.|:.||..:::|.||.||..:...::||||:::
plant   210 PPGTGKTLLARAVANRT--DACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272

  Fly   312 LTSKR--DRATDHESSKRFKNELLQLLDGMEHSLNGVFVLASTNLPWDIDEAFLR--RFEKKLLV 372
            :...|  |........:|...|::..|||.: :...:.||.:||.|..:|.|.||  |.::|:..
plant   273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFD-ARGNIKVLMATNRPDTLDPALLRPGRLDRKVEF 336

  Fly   373 QLPNAAERSCLI---NRLLGSSISLNPRLLEQLVEISDHFTGDEIRLACKEISMHRVRCATK 431
            .||:...|:.:.   .|.:.....:...||.:|...|   ||.:||..|.|..|:.:|...|
plant   337 GLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNS---TGADIRSVCTEAGMYAIRARRK 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10793NP_570054.2 LisH 31..55 CDD:462501
RecA-like_VPS4-like 208..372 CDD:410917 57/168 (34%)
RPT1ANP_175778.1 PRK03992 113..423 CDD:179699 84/289 (29%)
Blue background indicates that the domain is not in the aligned region.

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