DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10793 and RPT2a

DIOPT Version :10

Sequence 1:NP_570054.2 Gene:CG10793 / 31308 FlyBaseID:FBgn0288967 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_194633.1 Gene:RPT2a / 829025 AraportID:AT4G29040 Length:443 Species:Arabidopsis thaliana


Alignment Length:251 Identity:85/251 - (33%)
Similarity:142/251 - (56%) Gaps:23/251 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 ILQENI-------KIK------WSDVCGNQRAIELIKEAVLTPIEFPQLFAH-GLKPWRSLLLHG 246
            |||:.:       |::      ::|:.|.:..|:.|||||..|:..|:|:.. |:||.:.::|:|
plant   165 ILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYG 229

  Fly   247 PPGSGKTLLAKALYSETQGQVTFFNITASIMVSKWRGESEKILRVLFHMAAKRAPSVIFFDEIES 311
            .||:||||||||:.:.|  ..||..:..|.::.|:.|:..|::|.||.:|...:||::|.|||::
plant   230 EPGTGKTLLAKAVANST--SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDA 292

  Fly   312 LTSKR-DRATDHESS-KRFKNELLQLLDGMEHSLNGVFVLASTNLPWDIDEAFLR--RFEKKLLV 372
            :.:|| |..:..|.. :|...|||..|||.: |...|.|:.:||....:|.|.||  |.::|:..
plant   293 VGTKRYDAHSGGEREIQRTMLELLNQLDGFD-SRGDVKVILATNRIESLDPALLRPGRIDRKIEF 356

  Fly   373 QLPNAAERSCLINRLLGSSISLNPRL-LEQLVEISDHFTGDEIRLACKEISMHRVR 427
            .||:...|. .|.::..|.::|:..: ||:.|...|.|:|.:|:..|.|..:..:|
plant   357 PLPDIKTRR-RIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10793NP_570054.2 LisH 31..55 CDD:462501
RecA-like_VPS4-like 208..372 CDD:410917 64/168 (38%)
RPT2aNP_194633.1 PTZ00361 7..443 CDD:185575 85/251 (34%)
Blue background indicates that the domain is not in the aligned region.

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