DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10793 and AT4G27680

DIOPT Version :10

Sequence 1:NP_570054.2 Gene:CG10793 / 31308 FlyBaseID:FBgn0288967 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_194498.1 Gene:AT4G27680 / 828882 AraportID:AT4G27680 Length:398 Species:Arabidopsis thaliana


Alignment Length:353 Identity:102/353 - (28%)
Similarity:179/353 - (50%) Gaps:60/353 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 AATQALSNEQPLQIKKMETATESNGQDN--ACEIEHVHLGGDDVLFSSLEWQSLAELVKTSILQE 199
            |:.:||.:::.:..:......::|..::  ||::                           |..:
plant    40 ASKKALEHKKEISKRLGRPLVQTNPYEDVIACDV---------------------------INPD 77

  Fly   200 NIKIKWSDVCGNQRAIELIKEAVLTPIEFPQLFAHG--LKPWRSLLLHGPPGSGKTLLAKALYSE 262
            :|.:::..:.|.:...:.:.|.|:.|::.|:|||:|  |.|.:.:||:||||:|||:||||:..|
plant    78 HIDVEFGSIGGLETIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKE 142

  Fly   263 TQGQVTFFNITASIMVSKWRGESEKILRVLFHMAAKRAPSVIFFDEIESLTSKRDRATDHESSKR 327
            : |.| |.|:..|.::|||.|:::|::..:|.:|.|..|::||.||:||...:| |:||||:...
plant   143 S-GAV-FINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVESFLGQR-RSTDHEAMAN 204

  Fly   328 FKNELLQLLDGMEHSLNG-VFVLASTNLPWDIDEAFLRRFEKKLLVQLPNAAERSCLIN-RLLGS 390
            .|.|.:.|.||.....:. |.|||:||.|.::|||.|||..:...:.:|:..||:.::. .|.|.
plant   205 MKTEFMALWDGFSTDPHARVMVLAATNRPSELDEAILRRLPQAFEIGIPDRRERAEILKVTLKGE 269

  Fly   391 SISLNPRL-LEQLVEISDHFTGDEIRLACKEISMHRVRCATKIGDRSIGLLAKESPAAIEANVEK 454
            .:  .|.: .:.:..:.:.:||.:|...||:.:...:|   :|.|..    .|..|..       
plant   270 RV--EPDIDFDHIARLCEGYTGSDIFELCKKAAYFPIR---EILDAE----RKGKPCL------- 318

  Fly   455 AFRQVRPLGQ----KLLAKHEQWQQENG 478
               ..|||.|    |:||..::.|...|
plant   319 ---DPRPLSQLDLEKVLATSKKTQVAAG 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10793NP_570054.2 LisH 31..55 CDD:462501
RecA-like_VPS4-like 208..372 CDD:410917 69/166 (42%)
AT4G27680NP_194498.1 RecA-like_ATAD1 85..250 CDD:410928 69/167 (41%)
AAA_lid_3 274..310 CDD:465537 7/38 (18%)
Blue background indicates that the domain is not in the aligned region.

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